| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1037 |
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| Symbol | csf4 |
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| ID | 7136770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 935088 |
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| End bp | 937397 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643529435 |
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| Product | CRISPR-associated DEAD/DEAH-box helicase Csf4 |
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| Protein accession | YP_002425510 |
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| Protein GI | 218665630 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR03117] CRISPR-associated DEAD/DEAH-box helicase Csf4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAATG ACCCCTGTTG CCGTGATAGA TTAAATATAC TATTGTTAGT CTATAGCCAT
CTTCGAGGAT TTGCAAACAT GCCCACAGTG ACAGTCCCGC TCATCTCCGT ACCCGACGCC
CACGCCATGG CCACCAACAT CACCGACACG TACCGCAACC TGGTGGCCAT CGGCCTTCAC
GTTGAAGCAA CACGGTGGCC GCCGGCGGTG GACATCGCGA GTTTGCCGCG CAAAAGCCTG
TTCTTCTCCC CCGCGCAGCA CACCAAGATC GAAGAGGCGG CCCAAAGCTT GAGCCTTTCT
TTCCAGCAAA CATTCGCCAC GCTGTGTGCC GCAGGGTTGG CGGAAACCAG CGCCAAGCAC
GACGCTTTCA ACTCCGCTTT CGCCTTGACC ACTCCGCCGC CCTTCTCCGG CGCGTCCCAA
GAGCAAGCGT TGTTTTATCG GAATTGCCTG ACCTCCCTGC GCCAAAAGCG CATCGGCATG
CTGGAAGGAT CCACTGGCGT TGGAAAATCT CGGGCCATGA TTATGGCCGC CCTGACCATG
GCCAAAGAGC GGCCAGATCT GCAGAAGATC GTGATTACCG CGCCAACTCT CGCTGTGCTG
GGCCATCTCT GGTCTGAACT GGAACGGTTG ACGGCTGAAG GGTTGGCGGG CGGGGTGCAA
GCCGGCTTCT TCCCCGGATC CCAGGAATTC ATCGATCCAG GAAAGCTCCA GGAATACCTG
GACCAAAGCG GAGACAAAGA TCCTGCCGTA CAGCTCTGGA TGGGCCAGGG CGGCCCCCTG
ATACATGAAG CCGCGCTGAT CCGCGCCATG TCCCGCGCGC CAACCAAGAT GCACCACATG
ACGCACGACC TGAAGGCGTT GGCCACCAAC CTGAACCCGC AAGATTTCGT GACCGAAGAC
GATGAGGATA AGCGCCTGGT GGAATCGCGG GAATATGCCC GCAAAAGCCG GATCCTTTTT
TGCACGCACA CCATGCTGGG ACTGGCTTTC CGGGATAAGT GGGGATTGTT CGGACAGCCG
GATATACTCA TTGTCGATGA AGGTCATCTC TTCGAGCAGA ATATCTCGCG CGTATATTCC
AACGCGCTTT CCCTTCGCAT GTTGCGATTC CATCTCTACG TTTCCAAGAG AAAAACCGGG
GCCGGAAAAG GCTCTGTCGT GAGCAAGGCG GTGTCTGCCG TGTCCCACTG CATCCAGCAG
GTATCCGCGC TGGACGTCGG CGACGGGCAA ACACTCTGCC TGGATGCCGG CAATAAGGAA
TTGGAGACAT TATTTTCCGA CCTCGACGCC GCCCTCAACA AAAAGGCGCT CTCCGTCGTC
AAGGATGTCA AAAAAGCCAG ATTCATTCTG GATAACGCCA TAACCGCCAT CCAGGGAAAA
GCGAGCACGG TCTACCTGCA ATTTTCTCCC GACCGGCGCT TTCCGTCGAT CATCTCCGGA
CGAGAGGACT TGGGAAAGGT GCTGGGCGGC ATCTGGAAGG ACATAACTCA TGGCGCCATT
ATCGCTTCGG CCACGCTCTA TCTTCCCGAC CGCTTCGGGC AGATGAAATG CGACTATCTG
AAAAGCGTGC TCGCGCTTCC CCTGTCTCGC CTGGACACGC CATCACCCAT TGTGGCGCCG
TGGGTCCGCA ACATTCCTCA TCTGCATGTT CCAAATGCCA AAGCGGCGTT TCTTTTGTCC
CGCCCAGTCG GCAAAACCGA GCAAGGCGAC ATGAATTTGT GGCTTTACAA CCTCTCATTG
AGCACCGCTG CGATTCTACG CAAGAAACAA CACGGGGGAA CCGTTATTCT CACGGTCGCT
TTCTCGCATG CCTCTGCCAT CGGTCAGCGC TTGGTGGAAC TTGGCATACC TGCGGAACGC
ATTGTGATTC AGAGCGAGAA AAACCGCTTC TCCTCCGCCG AACAACAATA CCGGGCGCTC
TACGCCAATG GAATCCAACC CATCCTGATC GCGGCTGGCG CGGCATGGAC CGGCATCGAT
CTCACCGACA AGAGCGTTTC TCCCGATAAA GATCGTCTTC TGTCCACGCT CATCCTGACC
TGCGCGCCAG TCGGCCTGAA TCGCAGCCTG TCCATGCTGA AGCGCATCGA AAAAACCAGC
GTACGCCCGA TTATCAACGA GTCTCTGATG ATGTTACGGC AAGGTCTCGG GCGCATTGTT
CGGCATCCCG ACATGCAAAA GATCGACATC TGGATGCTCG ATGGCCGGCC CTGGAGTTCC
TGGCCATACA TGGAATCCTG GCAGGAGTCG GTGAAAACCA TCCTGGACGG GTATCCAAAA
AAGAAGCTGT TCGTGTTTCC TCCGAAATAG
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| Protein sequence | MHNDPCCRDR LNILLLVYSH LRGFANMPTV TVPLISVPDA HAMATNITDT YRNLVAIGLH
VEATRWPPAV DIASLPRKSL FFSPAQHTKI EEAAQSLSLS FQQTFATLCA AGLAETSAKH
DAFNSAFALT TPPPFSGASQ EQALFYRNCL TSLRQKRIGM LEGSTGVGKS RAMIMAALTM
AKERPDLQKI VITAPTLAVL GHLWSELERL TAEGLAGGVQ AGFFPGSQEF IDPGKLQEYL
DQSGDKDPAV QLWMGQGGPL IHEAALIRAM SRAPTKMHHM THDLKALATN LNPQDFVTED
DEDKRLVESR EYARKSRILF CTHTMLGLAF RDKWGLFGQP DILIVDEGHL FEQNISRVYS
NALSLRMLRF HLYVSKRKTG AGKGSVVSKA VSAVSHCIQQ VSALDVGDGQ TLCLDAGNKE
LETLFSDLDA ALNKKALSVV KDVKKARFIL DNAITAIQGK ASTVYLQFSP DRRFPSIISG
REDLGKVLGG IWKDITHGAI IASATLYLPD RFGQMKCDYL KSVLALPLSR LDTPSPIVAP
WVRNIPHLHV PNAKAAFLLS RPVGKTEQGD MNLWLYNLSL STAAILRKKQ HGGTVILTVA
FSHASAIGQR LVELGIPAER IVIQSEKNRF SSAEQQYRAL YANGIQPILI AAGAAWTGID
LTDKSVSPDK DRLLSTLILT CAPVGLNRSL SMLKRIEKTS VRPIINESLM MLRQGLGRIV
RHPDMQKIDI WMLDGRPWSS WPYMESWQES VKTILDGYPK KKLFVFPPK
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