Gene AFE_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1000 
Symbol 
ID7136890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp912929 
End bp913564 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content58% 
IMG OID643529398 
ProductBRO family protein 
Protein accessionYP_002425473 
Protein GI218666564 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.173667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCC ATACCCCCGG CGCGTCCGCG CCTGTGCAGG CTGCAAAGTC CGCTGTCTTT 
CAATTCCACT CCACCGAAGT CCGCACCGTA GATCGTGACG GTCAGGTGTG GTTTGCTGGC 
GATGTTGCCA AGGCGCTGAA CTATGCTGAT GCCGTGCAGA TGACCCGGGT TCTCGATGAG 
GACGAAAAGG GTCTGCACAC TATGCAGACC CTTGGCGGCA ACCAGCAGGT TGTTGTTCTC 
TCCGAATCGG GCCTCTATCA CGCCCTGCTC AAATCTCGCA AACCAGAGGC TCGCCCTTTC 
AGGCGATGGG TCACTGCTGA AGTCTTGCCC GCCATTCGTC GTAATGGCAC TTCTTCAGTC 
GCGGCCGCGC AGATCCCCGA TGCATTACAG AAAACCAGGT ATCTGCTCAC GGTCTATGCG 
GATGGCCGCT CCCAGATCAC GCCACTTCCA CAGGATGCGG CCGTGCTGTC AGCCAAGAAC 
AAAATCAGCA TGTCCACGCT CATGCGCGAA TTCATACCCA GCGAGATATT GCCGGACCTG 
ATGCACATCG GACTCGACCG TCTGGCCAGG ATGGCGGAAC AAGGCAGAAA TGTCCCCGTC 
TGCGCCACCC CCGTCGATAA GGAAGTCGAG CCATGA
 
Protein sequence
MDTHTPGASA PVQAAKSAVF QFHSTEVRTV DRDGQVWFAG DVAKALNYAD AVQMTRVLDE 
DEKGLHTMQT LGGNQQVVVL SESGLYHALL KSRKPEARPF RRWVTAEVLP AIRRNGTSSV 
AAAQIPDALQ KTRYLLTVYA DGRSQITPLP QDAAVLSAKN KISMSTLMRE FIPSEILPDL 
MHIGLDRLAR MAEQGRNVPV CATPVDKEVE P