Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0992 |
Symbol | |
ID | 7134940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 907532 |
End bp | 908305 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643529390 |
Product | hydrolase, TatD family |
Protein accession | YP_002425466 |
Protein GI | 218666863 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.313199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGTAG ATTCGCACTG TCATCTGGAT TTCGAAGATT TTGACGCAGA CCGATCTGAG ATCCTGGCCC GTGCCCGGGC GGCGGGCGTG GGGGAAATGC TGATCGCCGC CGTCGTCGAG GCGCACTGGC CGCGGGTGCA GGCCCTTGCC GCCGGGCACG CCGGCGTATG GGCGGCAGTG GGAGTACACC CCAACGAACC GGCTGGGGCA ACGCCGGAAT GGGAGCGTCT GCTGGTCGCG CTGGCCGCCG ATAAGGTGGT TGCCGTCGGG GAGACCGGCC TGGACTATTA CCGCAGCGAA GGGGACTTGT CCTGGCAACG GGAACGGTTT GCCCAGCATA TAGCGGCGGC CAAGGCCACA GGAAAGCCGT TGATCGTGCA CACCCGTGCG GCGGCCGCAG ACACCCTTGC CATGCTGCGC AGTGAAGATG CGGCGGCCGC CGGCGGCGTC ATCCATTGCT TTACCGAAAA CCGAGATTTT GCGCGGACGG CCCTGGATAT GGGTTTTTAT ATCTCCTTTT CCGGCATCGT GACGTTCAGG AAGTCCGTCG AATTGCAGGC GGTGGCGAAG ATGCTGCCGG CGGATCGCCT GCTGGTGGAG ACGGATGCGC CTTATCTGGC TCCCGAGCCG CAGCGCGGCA GGCGCAACGA GCCGGCTTTC GTGGCCCATG TCGCGGCCTT TCTCGCAGCG TTGCGGGGCG AGGCGCCGGA GGCGGTCGCC ACGCAGACCA CCGCCAATTT CCACGCCCTG TTCAGACACG CGGTAGCGTC ATGA
|
Protein sequence | MLVDSHCHLD FEDFDADRSE ILARARAAGV GEMLIAAVVE AHWPRVQALA AGHAGVWAAV GVHPNEPAGA TPEWERLLVA LAADKVVAVG ETGLDYYRSE GDLSWQRERF AQHIAAAKAT GKPLIVHTRA AAADTLAMLR SEDAAAAGGV IHCFTENRDF ARTALDMGFY ISFSGIVTFR KSVELQAVAK MLPADRLLVE TDAPYLAPEP QRGRRNEPAF VAHVAAFLAA LRGEAPEAVA TQTTANFHAL FRHAVAS
|
| |