| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0980 |
|---|
| Symbol | gcvH |
|---|
| ID | 7136854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 896688 |
|---|
| End bp | 897071 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643529378 |
|---|
| Product | glycine cleavage system H protein |
|---|
| Protein accession | YP_002425454 |
|---|
| Protein GI | 218666663 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.695732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA TTCCGGAGAC CTTGCGTTAC AGTGATACCC ATGAGTGGGT GGAAGACCTG
GGAGGCGGAC GCTACCGGGT GGGAATTACC GATCACGCCC AGGAATTGCT GGGGGATCTG
GTGTTCGTAG AGGCCCCGGA GACGGGTAAG ACGATTCGCG GTGGTGCAGT CTGCGGTGTG
CTGGAGTCGG TCAAGGCGGC GGCGGATTTG TATGCGCCGC TCGACGGCAC GGTGGTGGAG
CGTAACGACG GGTTGGCGGA TAACCCGCAG TGGCTCAATG AAGACCCTTA TGGCCGGGGC
TGGATCATGG TGGTGGAGGC GGATGCGTCC GCTGGTGACG GGCTGATGGA TGCGGCGGCC
TACGCCAAGA TCGCGGAGGT CTGA
|
|---|
| Protein sequence | MSKIPETLRY SDTHEWVEDL GGGRYRVGIT DHAQELLGDL VFVEAPETGK TIRGGAVCGV
LESVKAAADL YAPLDGTVVE RNDGLADNPQ WLNEDPYGRG WIMVVEADAS AGDGLMDAAA
YAKIAEV
|
|---|
| |