| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0969 |
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| Symbol | |
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| ID | 7136563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 889334 |
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| End bp | 890467 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643529367 |
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| Product | type IV pilin, putative |
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| Protein accession | YP_002425443 |
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| Protein GI | 218666881 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCATG CTGACGGCTC AGAAACGGGT TTTACCCTCA CCGAACTGCT GGTAGCCCTG
GTGATCGGCA CCTTGCTGGC GACTGCCGTG TTCACGTTCT TTCTGAACAG CAGCCAGATC
ATCACCAACC AGAGCAGCAC TACGGATATG TGGCAGCGGG GACGTAACGC GCTGGCGTTA
GTGCGCCAGG CGGTGGAGTC GGCGGGGTTT GGGTTACCAC AGATTTCTGA TTGCCCTAAT
GGGATTGCCG CTTATAACAG CAATCAGACT GCTTCGCCTT TTTCTTTGAC GGCTATCACC
GCCTCCGTGC AAAGCAGTGG CACCTATGAC CCCACAAACA CCAGCAATAT CAATACGTAT
TCATTGATGA CCGTGGCGGG GGGCGCATCA TTTGGCAACG CTCCGGCAGC GCAGATCAGC
TCCATTCCGA GTATGGCCTC GCAGCGGGTG TTTTTGACGG CGACAGCATT CATCAATTCT
GGGGATATGT TTATTGTACA AATTCCCGGA CAGGCCTGCC TGATGGCACA GGTGACCAAC
CTGCTTACTC AAGGCAACGG GATTGGCGTT GTTCATAATT CTGGACTGTC CAATTACAAT
CCTTCTGGGG GTTTTCAGAC ATTAGCGGGG GCTATTTATC CTGGCCTTAG CAGCACCGCC
TTTGTCGGTG CCAACTTCAT CGACTTGGGC AGCAATAACT TCACCATCAA TCAATTCACC
ATTGGTGACA GCGGCGGCAC CGCGACACCG ACCCTCTACC TAACCCAATA TACCGCCAAC
CAGACCACCA CATCTACTCG TCAGGCCCTA GCGCGTGGTG TCGTAGATCT ACAATTAGAA
TATGGTCTCG GCATTAATGG CGCCATAACA CAATGGGTTC TTCCTGCAAA TTACACGCCG
TCGGCTACAC AGCAAATTCT TGCCGTTCGG ATAGCCATGC TTGCACGTAG TACCCGCTAC
ATGCCCAATG AAACCAGCCC GGCCAGCTTC ATTATGTTAC CTCACCAAAA TCTAAGCTAT
ACCGTTCCGA CATCCAATGG CCCAGGCTGC CTGCAAGGTG ATTGTCGTCA CTATGCCTAC
CATCTTTTCG AAAGCGTGGT GCCGGTTCGA AATAATATCT GGGGTGGACC ATGA
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| Protein sequence | MRHADGSETG FTLTELLVAL VIGTLLATAV FTFFLNSSQI ITNQSSTTDM WQRGRNALAL
VRQAVESAGF GLPQISDCPN GIAAYNSNQT ASPFSLTAIT ASVQSSGTYD PTNTSNINTY
SLMTVAGGAS FGNAPAAQIS SIPSMASQRV FLTATAFINS GDMFIVQIPG QACLMAQVTN
LLTQGNGIGV VHNSGLSNYN PSGGFQTLAG AIYPGLSSTA FVGANFIDLG SNNFTINQFT
IGDSGGTATP TLYLTQYTAN QTTTSTRQAL ARGVVDLQLE YGLGINGAIT QWVLPANYTP
SATQQILAVR IAMLARSTRY MPNETSPASF IMLPHQNLSY TVPTSNGPGC LQGDCRHYAY
HLFESVVPVR NNIWGGP
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