| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0954 |
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| Symbol | cydB |
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| ID | 7136073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 869849 |
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| End bp | 870982 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643529352 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_002425428 |
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| Protein GI | 218666440 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCTT ACGTATATTT AAAGATATTC TGGTTCCTGA TTCTGGGAAT CCTGTTGATG
GGCCTCGCTA TCATGGTCGG TATGGATATG GGCGTTGGCA CTCTGATGCG CTTTGTCGGC
AAAACCGACG GCGAACGCCG CGAAGCGCTG AACATCGTTG GCCCGCACTG GGACGGTAAC
CAGGTGTGGT TCATTCTTGG CGGTGGCGCG ATTTTCGCGG CCTTTCCAAG CCTCTATGCG
ACGTCTTTTT CGGTCTTCTA CATCGTCATG ATTCTCCTGC TGTTCAGCAT GATCATGCGC
CCTGTCGCCT TTGAATACCG TTCCAAGGTG CCCAGTCATC GCTGGCGCGA TTCCTGGGAC
TGGGTCTTTC TCATTTCCGG CGCCCTGCCC ATGATTGTTT ACGGGGCTGC CATGGGGAAT
ATTCTGGAGG GCGTCGGCTT TCACTTCGGC TGGGACGGCC AGTATTATCA GACCGAATCC
TTCATCTGGT ATCTGCTGAA TCCTTTCGCG ATTCTCTGCG GCGTGCTGTC GCTGAGCCTG
GCCATCTATC AGGGCGGCAC CATGCTCATG ATACGCGGTA GCGGTGCGCT GTATGACCGG
GCACGGAATT ACGCCAGCGT CGGCGGCATC GCGGCGCTGG TGATCTTCAT CATCGGTGGC
TTCATGGTGT CCGGCATGAA GGGTTTCCAA CTGGTCAGTG GTGATCCGGG CATGCCCGCG
AATCCGGTCA GCGGCCAGAC GGTCACACTC GCGAACGGGG CGTGGATGGC CAACTATTCC
GCCCACCCCA TTCTCTGGCT GGTGCCCTTG CTGGGTTTGG CCGGCATGGT TTTGGGTGTA
CTCGCACTGC GCGCCAACAA GCCCACCCTC GGCTGGTGGA TGGGTGCGGT GGCATGGATC
GGCGTGATCG GTGCGGTGGG CACCTCCATG TTCCCCTTCC TGATGCCTTC CACGGACAAC
CCGGACCAGA GCCTCACGGT CTGGAATGGC ACCGGTAGCG AGTACAATCT GGTCTGGATG
ACCATCTTTG GTCTGATCTT CCTACCCATC ATCATCAGTT ACACCACCTG GTGTTTCCGG
GTGATGCGCG GCAAGGTGGC GGCACCCGAC ACGCAAGACG ACCACGCGTA TTAA
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| Protein sequence | MDAYVYLKIF WFLILGILLM GLAIMVGMDM GVGTLMRFVG KTDGERREAL NIVGPHWDGN
QVWFILGGGA IFAAFPSLYA TSFSVFYIVM ILLLFSMIMR PVAFEYRSKV PSHRWRDSWD
WVFLISGALP MIVYGAAMGN ILEGVGFHFG WDGQYYQTES FIWYLLNPFA ILCGVLSLSL
AIYQGGTMLM IRGSGALYDR ARNYASVGGI AALVIFIIGG FMVSGMKGFQ LVSGDPGMPA
NPVSGQTVTL ANGAWMANYS AHPILWLVPL LGLAGMVLGV LALRANKPTL GWWMGAVAWI
GVIGAVGTSM FPFLMPSTDN PDQSLTVWNG TGSEYNLVWM TIFGLIFLPI IISYTTWCFR
VMRGKVAAPD TQDDHAY
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