| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0938 |
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| Symbol | hoxY |
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| ID | 7134564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 852265 |
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| End bp | 853062 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643529337 |
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| Product | [NiFe] hydrogenase, delta subunit, putative |
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| Protein accession | YP_002425413 |
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| Protein GI | 218665380 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCTG CCAAACCACG CCTTGCGGTG CACAAGTTCA GTTCTTGCGA CGGTTGTCAA
TTGGCCTTCC TGAATCTGGG GGAAGACCTG CTGCGGCTTG CCGAGCTGGT GGAGATCGTT
CACTTCGCCG AGGCCGGCCC CGTGGACCCG GATGCCGTCG TGGACATCGC CTTCGTGGAG
GGGAGTGTCT CCACGCCCGA AGACGAGGAG CGCATCCAGA AAATCCGTAA AAACAGCCGC
CACCTTATCA GCATCGGCGC CTGTGCCACC GCTGGCGGCC TCCAGGCCTT GCGCAACTTG
GCCGACGGCC CCGGCTGGAT TGCGGAGATC TACGCCCAGC CCGAACACAT CCATAGCCTG
GCCACCTCCA CCCCCATCGC CGCCCATGTC CCGGTGGATC TGGAACTGTG GGGCTGTCCG
GTGAACGGGC GCCAGGTCCT GGGGGCGGTG CGCGCCCTCC TCTTCGAGGT CGTGCCAGCG
CTCGAAAAGG ACAAGGTGTG CCTGGAGTGT AAACGCCATC AAGCGGTCTG CGTACTGGTG
GCCAAGGGAC TGCCATGCAT GGGCCCGGTG ACGCTCACCG GCTGCGGGGC GCTGTGCCCC
CGTTTCGGAC GCGATTGCTA CGCCTGCTAT GGGCCGGCGG AAAATCCCAA CGCCACGGCA
TTGGGGCGAC GGTTGGAGGG ACTCGGCCTG GTGCCGGAGG CCGTCGCGCG GCGATTCCTC
TTCATCAACA GCGGCGCCCC GGCCTTTGCC GAGGCTGGCC GCCATTGGCG GGAGCAGGTC
CATGACCCAA AGCCGTGA
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| Protein sequence | MAAAKPRLAV HKFSSCDGCQ LAFLNLGEDL LRLAELVEIV HFAEAGPVDP DAVVDIAFVE
GSVSTPEDEE RIQKIRKNSR HLISIGACAT AGGLQALRNL ADGPGWIAEI YAQPEHIHSL
ATSTPIAAHV PVDLELWGCP VNGRQVLGAV RALLFEVVPA LEKDKVCLEC KRHQAVCVLV
AKGLPCMGPV TLTGCGALCP RFGRDCYACY GPAENPNATA LGRRLEGLGL VPEAVARRFL
FINSGAPAFA EAGRHWREQV HDPKP
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