| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0906 |
|---|
| Symbol | |
|---|
| ID | 7136394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 822007 |
|---|
| End bp | 823161 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643529306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002425384 |
|---|
| Protein GI | 218666229 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.330727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATACCG TCGTCGTCCT CGTCCTGCTG TTGGCGATCG CGCTGGGCGT CTGGATCGGT
CGGGTTACTT CTCCGCGAAA ACCTGTGCCG GATGTCCCGG ACACGATTCC CGAAATTTAC
ATTCAGGGAC TCAACCATCT CCTCAGTGAG CGCAATGATG AGGCGGTGGA GGTTTTTCTG
GATGCCCTGC GGCAACACCC CGAAAGCGTT GATATTCTAC TCGCCTTGGG GCGACTCTTC
CGGCGCCGCG GAGAGTTGGA GCGCGCCTTG CGGGTACATC AGTACCTTCT GGATCAGCCG
GCGCTGGCAT CTGATTTGCG GCAGAGTGTA CTCTTCGAGA TTGCACAGGA TTACCTCAAG
GCCGGGATTC TCGATCGGGC CGAGTCCATC CTCAAAGAAC TACTGGATCG TCAACCCGAC
CATTTGGAGG GCCTTGCCAC GCTTGCCGAG TTGTACGAAC TGGGCAGCGA GTGGGCCAAG
TCTATCGCCG TGCGTCAGCA GTTGCACAAA ACGGGTACGC AGGGCCAGCG TCCGGTGATT
GCCATGCTCT ACGGTGAGCT CGCCGAGCAG TCTTTGCTCG CGGGAAAAGC AGAGCAGGCA
GGGGTCTTTT TAGGGATGGC GCGCAAGGAG GACCCGGAGA ATCCACGGGC ATTGGTGGTC
GGCGGGCGTA TCGCCTTTGA CCGGCAGAAC TGGGACGATG CCTTCGATCT CTGGAGAAAA
CTGCTGGATT CTCGGGTGGA GTCCGTAGTC CTGCTGGTTC TGGAACCATT TTTGAGCGTT
TTACCACATG TTGCGAATGG CGTGGATGCG CAAAAGGCAC GGGAACGCCT GTTGAATATG
TGTCGTTCGC CGCTGGCGGT AAAACTTCTG GCGCATGCCC TGCAGGGCGT TGAAGGAACC
TTGGCGGCGA CAACGTATTT AAGGCATCTG CTATTGCGGC AGCCGGACAT GCGGGTGATG
CAGGTTCTGT TGGAACTGGA TCCCGAGGCG CCAGATCCAA CATTGTATCC CGTTATGGCG
ATGGCAGTCA GAGGACTTTC GGTAGAACCG GCGGTTTTCC ATTGTCAGTC CTGTGGTTAT
CAGAGTCCTC AGTATTATTG GCGTTGCCCT AGTTGCCGTC AGTGGGGCAC TTTTTCCGGA
GGGTGCAGCT TGTGA
|
|---|
| Protein sequence | MDTVVVLVLL LAIALGVWIG RVTSPRKPVP DVPDTIPEIY IQGLNHLLSE RNDEAVEVFL
DALRQHPESV DILLALGRLF RRRGELERAL RVHQYLLDQP ALASDLRQSV LFEIAQDYLK
AGILDRAESI LKELLDRQPD HLEGLATLAE LYELGSEWAK SIAVRQQLHK TGTQGQRPVI
AMLYGELAEQ SLLAGKAEQA GVFLGMARKE DPENPRALVV GGRIAFDRQN WDDAFDLWRK
LLDSRVESVV LLVLEPFLSV LPHVANGVDA QKARERLLNM CRSPLAVKLL AHALQGVEGT
LAATTYLRHL LLRQPDMRVM QVLLELDPEA PDPTLYPVMA MAVRGLSVEP AVFHCQSCGY
QSPQYYWRCP SCRQWGTFSG GCSL
|
|---|
| |