Gene AFE_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0900 
SymboltyrA 
ID7136437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp816857 
End bp817762 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID643529300 
Productprephenate dehydrogenase 
Protein accessionYP_002425378 
Protein GI218665535 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGAGGC CATTGGCCGC GAACTCTAGC ATGCCGGACG TCCCCTTCCA GCGAATCGTC 
ATCGTCGGCC TGGGCCTGAT GGGCGGCAGT ATCGCCAAGG CCCTGCGCAG CAGGGGCTTC
GCCGGATCGC TGGTGGGTGT GGTCGTCGAT GCGCAAGCGG TTCGGCGACT GCGTTCTGCG
GCAAAGTATT GGCGGATCAG CCTGACCTGC GAACCGGAAC CGGCGTTGCG AAATGCCGAT
CTGGTGCTGC TCGCCACCCC TCCGCAAATC GCCCTGCGGC AGTTGCCGGA ACTGGTACGC
CATATATCTG CTACGGGGAT GGTCAGCGAT GTCGCCAGCA TCAAGACGCC GGTGGCGCAA
CTGGGCCGTC AGTTGCTGGG AGATCGCTTT ATCCCGGGGC ATCCCGTGGT GGGTGGGGAA
AAAACCGGAT TTGCGGCAGC GCGGAAAAAT CTTTATCAGG GCGCGCGCGT CATCCTGACG
CCCCTGCCGG AACAGGCTCC CGCCGCGCTG GACGCGGTGT GCGGTTTCTG GCAATGCCTC
GGTGCGACCG TTTCGCAAAT GACGCCGGAG GCGCATGACC AGGCTCTTGC CGCGACCAGC
CATCTGCCTC ATCTGCTGGC CTTTGCCTAC ATGGCGGGCC TGGCGGATCA GGTCCCCGCT
CTGCGGGATC TCGCCGGCGG CGGTCTGCGT GATTTTTCCC GGATAGCGGC CTCTGACCCC
GATCTCTGGA CTGCCATCCT CTCGGAGAAT CGATCGGCCG TCGTACAGCA TCTGAAGGCG
TTGCAGGAAA ATCTCGACAC TGTCCGGCAG ATGCTCGCAG GGGACGACAC ACGCACCCTG
AAAGCCTTTC TGAAGCAGGG CCGCGCCTGC CGTCAACAGT TTCAATTTCC TCCGCTAACC
TACTGA
 
Protein sequence
MPRPLAANSS MPDVPFQRIV IVGLGLMGGS IAKALRSRGF AGSLVGVVVD AQAVRRLRSA 
AKYWRISLTC EPEPALRNAD LVLLATPPQI ALRQLPELVR HISATGMVSD VASIKTPVAQ
LGRQLLGDRF IPGHPVVGGE KTGFAAARKN LYQGARVILT PLPEQAPAAL DAVCGFWQCL
GATVSQMTPE AHDQALAATS HLPHLLAFAY MAGLADQVPA LRDLAGGGLR DFSRIAASDP
DLWTAILSEN RSAVVQHLKA LQENLDTVRQ MLAGDDTRTL KAFLKQGRAC RQQFQFPPLT
Y