Gene AFE_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0879 
Symbol 
ID7136361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp799956 
End bp800627 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID643529282 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002425361 
Protein GI218666069 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCAC CAGTCCATCT GAATGCTCTG CGCGCCTTCG AGGCCAGCGC CCGCCACCAA 
AGCTTTTCTG CGGCGGCGGC CGAACTCAAC GTCACGGCAG CAGCAGTTGG CCAACTCGTG 
CGCTCGCTGG AGGACTGGCT GGGAACGCCC CTCTTCGTGC GCGGCAGCAG TGGCCGTGTG 
CGGCTCATTC CCACGGAGGC TGCCGAGCGG GCACTGCCAG ATATCCGTGC CGGGTTTGAT 
CGGCTCACTT TGGGGATACT GCTGCGTGAG CATTGGCGCT TGCAAAAGCC CGCTGACTTG 
GCCCAGGAAA CCTTGATCCA CGACTTGTCG ATGGACCGAC ACACAGCGTT CCCAACCTGG 
GAAGCATGGA TGAAAAAAGC CGGCGTGACG GACGTCATCA CTCAACGGGG CATGCGGATC 
AATAATTCCG CTGCGGTACT GCAGGCGGCG ATCGAGGGAC ATGGTGTGGC GCTGGCGCGC 
AGCGTCATGG CACGCGACGA CTTGGCAAGT GGGCGTCTAG TCAGACTGTT CCCAGACATC 
GACTTTGCAT CCGCACTGGC GTACTACGTC GTGTATCGAC CTGAATGTGC CAGTTTGCCC 
AAGCTGACTA CCTTTCGGGA TTGGTTGCTA GCAGAAGCCG CCCCCGCCCA AGCAGGAAAT 
GGAGAGTTTT AA
 
Protein sequence
MKSPVHLNAL RAFEASARHQ SFSAAAAELN VTAAAVGQLV RSLEDWLGTP LFVRGSSGRV 
RLIPTEAAER ALPDIRAGFD RLTLGILLRE HWRLQKPADL AQETLIHDLS MDRHTAFPTW 
EAWMKKAGVT DVITQRGMRI NNSAAVLQAA IEGHGVALAR SVMARDDLAS GRLVRLFPDI 
DFASALAYYV VYRPECASLP KLTTFRDWLL AEAAPAQAGN GEF