Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0863 |
Symbol | |
ID | 7134883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 786940 |
End bp | 788373 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529269 |
Product | RND efflux system, drug efflux transporter, outer membrane lipoprotein |
Protein accession | YP_002425348 |
Protein GI | 218666545 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.353434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCC GCATCGCCCT TATCCTACCG TTGTTGTTGC TCGGCGCCTG CGCACGCCTA CCGCCGCACC TCCCCGGCGG CAAAATGGCG CAGAATACGC AAATCAGCGG AACACTGGCA TACGTTGACG GCCATAATGG TGTGCTTACG GGTACCTGGC CCGTGTCAAA CTGGTGGACT TCGGCACAGC TACCGGCCCT GAACACGTTG ATCACCGAAG CGCTGCGCGA CAATCCTTCG CTGCAGGTCG CCAGTGCGCG CATTCTGCAA GCCAAAGCGG CTGCGACAGA CCAGCATGCC GCCCTTCTCC CGCATTTTTC CGCAGCTGCG TCGGTGACTC AGGAGTACTT TTCCCGGCAA GGCTTGCACG CCCCGTTGAA TGGCAAAACC ATCACCTATG GTGCTCTCAA TCCTCTGGAA ATGCGCTATC ACCTGGATTT GTGGGGACGG GACAGCGACC GCGTACGCGC CGCCCTGGGG GAAGTACGCG TACACCAGGC GGATTACGCC GAGGCAAAAT TATTGCTTTC CACCCAGTTG GCGTGGCACT ACCTTTTGCT GGCGGGTGAT GTACAACGCC TCCGGCAATT GGTTCGCGCG GAAGCTCTGC ACACCTCCTT ACTCCACCTG GAACAACAGC GCTGGCATGA CGGCCTGAGC GATGCCCGCG CTGTTTATCT GCAGGAAGAG GCGCGCGCAG GGGCACGCCA GTCGGTTGCC GACATGCAGG CAGCCATCGC TCAACAGCGC TATATATTGG CGGCACTGGT CGGACACGGA CCCGATTGGG GGCGGGATAT TCCGGCAGAG CCGTTGCCCA CGCTATCCAC GATCACCATG CCCAGGAATT TGCCCCTACG TCTCATTGCG CACCGTCCGG ATATAGTCGC TGCGCGCTGG GAAACAGAAG TCGCGGCGCA ACAGGTGGGT GCGGCACGCG CAGCCTTTTA TCCCGATGTG AATATCGCCC TGTTTGCGGG ATGGAACAGT ATTCATCTGG GAGATCTGTT CAGTCCCGGC AATCTCGCAC ATGCCCTTGG CCCAGTCATA TCTCTGCCGA TTTTCGAAGG AGGGAGATTA CGCGCCCAAC TGAAAGAGAA AAATGCATCA TACATAGCCA CGGAAGACCA TTATCGCGCC ACCATCCTCG GCGCGGTGCG CGAGATTGCC GGTCGGCTGG CCACCTGGCG ACAGATACGC CAAAAACTTC GGGCACAACG GCAGATGATT TACGCCGCCG AGCATACCAC GGCGCTGGCT GAATCTGCCT TTCATTCCGG CATTACGGAT AAAGCAGAAG CCTATGGCGC GCAGATTCAG GAGACGGAAA TAAGAAATCA ACTGCTGGCC TTAAAGATGC AAAATGCGCA ATCCTGGGTA TTGCTGCATT CAGCGCTGGG TGGCGGATAT ACCTCGCGGA AGAATCCCGC ATGA
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Protein sequence | MKRRIALILP LLLLGACARL PPHLPGGKMA QNTQISGTLA YVDGHNGVLT GTWPVSNWWT SAQLPALNTL ITEALRDNPS LQVASARILQ AKAAATDQHA ALLPHFSAAA SVTQEYFSRQ GLHAPLNGKT ITYGALNPLE MRYHLDLWGR DSDRVRAALG EVRVHQADYA EAKLLLSTQL AWHYLLLAGD VQRLRQLVRA EALHTSLLHL EQQRWHDGLS DARAVYLQEE ARAGARQSVA DMQAAIAQQR YILAALVGHG PDWGRDIPAE PLPTLSTITM PRNLPLRLIA HRPDIVAARW ETEVAAQQVG AARAAFYPDV NIALFAGWNS IHLGDLFSPG NLAHALGPVI SLPIFEGGRL RAQLKEKNAS YIATEDHYRA TILGAVREIA GRLATWRQIR QKLRAQRQMI YAAEHTTALA ESAFHSGITD KAEAYGAQIQ ETEIRNQLLA LKMQNAQSWV LLHSALGGGY TSRKNPA
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