| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0837 |
|---|
| Symbol | |
|---|
| ID | 7136686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 762091 |
|---|
| End bp | 762930 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643529243 |
|---|
| Product | general secretion pathway protein A, putative |
|---|
| Protein accession | YP_002425325 |
|---|
| Protein GI | 218667781 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA CGTTACTGGC CCTCTACGGG CTCAAGTGGA ATCCCTTCTC CGCCGATCTG
CCCATTGCGG CGGTCAGTGT CCCGCCCAAA GTCGAGGATT TCTGCTGGCG GATAGAACAT
GCTCTGGTCC GGGAGGGGGG CTTCGCTCTG ATCCAGGGCG ATCCCGGCAC CGGCAAGAGC
GTGATCCTGC GCTTGCTGGC GGAGCGCCTG TCCCGGTTGC CGGATCTGAC CGTCGGCGCC
ATCCATCACC CGCAGAGCAA TCTCGCGGAC TTTTACCGGG AACTGGGAGA TATCTTTGCC
GTCTCCCTCA AACCCAGTAA CCGCTGGGGC GGCTTCAAGG CCCTGCGCGA GCGCTGGCTC
GCCCATCTGG AGGCCACCCG CCGTCGCCCG GTGTTGCTCA TTGACGAGGC CCAGGAGATG
AATGCCCCGG TGCTCTGCGA ACTGCGCCTG CTGTCCAGTG CCCGCTTCGA TTCCCAGAGC
TTGCTCAGTG TCCTCCTCGC CGGGGATGCC CGACTCACCG AAAAACTGCG CCGGGAAGAA
CTGGTCCCGC TGGGCAGTCG CATCCGGGTC CGTCTGCACA CCGAGTCTGC CAGCCGTAAT
GAACTGCTCG GCTGCCTGGA ACACCTGATG ACCGAAGCCG GTAACGCCGG ACTGATGACG
GCAGGTCTCT GCCAGACCCT CTGTGATCAT GCCATGGGTA ATTACCGGGT GCTCACCCAA
ATGGCGGCCG AACTCCTGGC GGCCGCCACC CAACGCCAAC TGGATCAACT GGACGAGAAG
CTGTTCCTCG AACTCTACGG CCCCGCCCAG CAACCCGCCC GGCGCAAAGC CGCACACTGA
|
|---|
| Protein sequence | MSQTLLALYG LKWNPFSADL PIAAVSVPPK VEDFCWRIEH ALVREGGFAL IQGDPGTGKS
VILRLLAERL SRLPDLTVGA IHHPQSNLAD FYRELGDIFA VSLKPSNRWG GFKALRERWL
AHLEATRRRP VLLIDEAQEM NAPVLCELRL LSSARFDSQS LLSVLLAGDA RLTEKLRREE
LVPLGSRIRV RLHTESASRN ELLGCLEHLM TEAGNAGLMT AGLCQTLCDH AMGNYRVLTQ
MAAELLAAAT QRQLDQLDEK LFLELYGPAQ QPARRKAAH
|
|---|
| |