Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0835 |
Symbol | |
ID | 7135474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 760093 |
End bp | 761337 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643529241 |
Product | site-specific recombinase, phage integrase family |
Protein accession | YP_002425323 |
Protein GI | 218666400 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.916453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAG TACTTATCAA GCGCCCCACT ACGTTGGCGC GTTATCTGGG GGCTCCGCTC GCAGAAGAGA GGGATAATTT TCTCAAACAC TGTGCGCAGG TAGGTTACTC GCCCTCCATG CTCAAGAAGA TTTCTTGGGT GATCTGGGCT GTCGCAGAGT ACATTGGCAT TGATCATGGC AAGGTGACTA TGCAAGACAT TAGGATTGCT GTAGATCACC GGACGCGCTT TAAACGCCAA TCAACCCAGA CCAAGGAATC GAAGAGCACT CGCCAGATGT TTATCCATTT CGCGACGGAA TGGGCGCGAC ATATGGGTTG TCTTGGACAA GCTGCGAAAC CTCAGGATAG TTTCGCGGTA CAAATAGGGA TTTTTGCTCG CCACATGCGC GAAGAACGGG GACTATCTCC CGTGACTATT GCAACCCGTT GTGAACGGCT TGGCTGGTTT TTCGCCGGAT TAAATCCGCC ACGAGGCACG CTGGATGCAA TCACCATTTG CGATCTCGAT GCCTTCGTCG AACTGAAGGG CCAACAAGGC TGGACGCGCG CCTCACTGGG CTCATTGGCC AGCTCCTTAC GCAGCTTTTT TGCTTTTGCT GAAGCTCGCG GCTGGTGTGC CAAAGGGTTA ACGGCGACCA TTGAATCGCC GCGACTATAT ACCCGCGAGG GAATCCCGGA GGGCCCGGGT TGGGAAGATG TACAGCGTCT CTTGGTCAGT ACTGCTGGCG ATCATCCTGT AGATATTCGC GATCGCGCCA TTTTGATGTT GCTGGCATTG TACGGATTGC GCCGTGGCGA GGTCGCAGCA CTTCAACTCG AGCATTTGGA TTGGGACGGG GATAAAATTT GCGTGGTACG ACCTAAACAG CGCATCGCTC AGCGTTATCC CTTACTGCCC AGTGTGGGCG AAGCCATTGT GCGCTATCTG CGCGATGTAC GTCCTCAGTG TGAACATCGG GCGTTATTCC TCACGATCGG TGCCCCCATG CGCCCACTTT CGGCGGAGAG TATCTCGCAT GTCGCCCGCG CACGCTTAAA CCAGCTTGGT CTCACGCTCT CTCCTCGCGG GGCGCACTGC CTGCGTCACG CCTGTGCCAG TCATCTCCTC TCTTCGGGTT TTTCACTAAA GCAAATTGGT GATCACCTTG GTCATCGCAA CGCCAATTCG GCGCTGAGCT ATACCAAGGT TGATCTGACG GGGTTGCGAC AGGTCGCCGA ATTCGACTTG GGGGGTTTAC TGTGA
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Protein sequence | MMEVLIKRPT TLARYLGAPL AEERDNFLKH CAQVGYSPSM LKKISWVIWA VAEYIGIDHG KVTMQDIRIA VDHRTRFKRQ STQTKESKST RQMFIHFATE WARHMGCLGQ AAKPQDSFAV QIGIFARHMR EERGLSPVTI ATRCERLGWF FAGLNPPRGT LDAITICDLD AFVELKGQQG WTRASLGSLA SSLRSFFAFA EARGWCAKGL TATIESPRLY TREGIPEGPG WEDVQRLLVS TAGDHPVDIR DRAILMLLAL YGLRRGEVAA LQLEHLDWDG DKICVVRPKQ RIAQRYPLLP SVGEAIVRYL RDVRPQCEHR ALFLTIGAPM RPLSAESISH VARARLNQLG LTLSPRGAHC LRHACASHLL SSGFSLKQIG DHLGHRNANS ALSYTKVDLT GLRQVAEFDL GGLL
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