Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0815 |
Symbol | |
ID | 7134596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 742919 |
End bp | 744691 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529221 |
Product | voltage-gated chloride channel |
Protein accession | YP_002425303 |
Protein GI | 218667253 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTCGGA CGAACCCGGC CTTTCATCTG GTGCTGGCGT TCTTTGTGGG GATTGTCGCG GGCTTGGGTG CGGTCGCTTT CCGACGCCTC ATCGGTCTGA TGCATAATGC CTTCTTCTTC GGTCAGATTT CCTCACGCTT TGATGACTTG CGGCATTCCG CAGCCAGCTT CTGGGGTTTA GGGGTAGTGC TGGTCCCCGT TCTCGGCGGA CTGGTGGTGG TCTGGCTCGT CCGGACTTTT GCGCCAGAAG CCAAAGGGCA CGGCGTACCC GAAGTGATGG ATGCCATTTA TTATGGGAGC GGCGTTATTC GGCCCGTGGT GGTTCTGGTG AAGGCGCTCG CGTCTTCTAT CAGTATCGGC AGTGGCGGAT CGGTAGGACG GGAGGGGCCG ATTATTCAGA TTGGAGCCGC CTTCGGCTCC AGCCTGGCCC AGTGGTTGCG GTTGCAAGAA TGGCAGAGAC TGGGGCTGAT TGCGGCGGGA GCGGGCGCCG GCATTGCCGC GACGTTCAAC ACACCGGTGG GCGGCATATT GTTTGCGATC GAGCTCATGC TGGTTGAAGT CAGTGCGCGA ACCCTTGTTC CGGTCATGAT CGCCACAGGT ACCGCCGCCT TCGTATCACG CCTGTTTCTG GGTGATTATC CGTCGTTTAT CATCTCTCAG CACATCATCA ACCGGACCAT GCACCAAAGC GCCGGTGCCT ATGCCGCCTA TGTTCTGCTC GGTCTTTTGG CGGGCGGGGC CGGCCTGCTG TTCACAAGCA GTCTCTATTG GACGGAGGAT CGCTTCGAGC GCTGGATCAA AAATCCCTAC GCACGACACG CCGCGGGCAT GCTGGGCGTA GGCTTGGTCA TTTATTTCAT GATCACCTTT ACCGGTCACT ACTATGTAGA AGGCGTGGGT TATGCGACGG TTCAGGATGT TCTCGACGGC GCCATTACGC ATCCCGGTTT TCTCCTGCTC CTGCTTTTAC TGAAGATCCT GACTTTTTCC GTTACACTGG GTTCCGGAGG GTCGGGTGGT GTATTCTCTC CCTCACTGTA TGTCGGGGCA GTCCTGGGCG GGCTATATGC CGTCATCGCC AATCATTTAC TGCCGGGAAT CGGGATCAGT ATGACCATCG CGGCCGCCTT GGGGATGGCC GGGATGGTCG CCGCGTCTAC CGGTGCCGCC GTTACTGGTG CCGTGATGAT TTTTGAAATG ACCAGCGACT ACCACATTAT CATCCCCTTG ATTATCGTTG CCTCTCTGGC CTTTGGAGTC CGTCGATTGA TCACCAGGGA GACGATTTAC ACGCGCAAAC TGATCCGCCG CGGTCATTTT ATCCCTGAGG CGCGGCACAG CAATCTCTAC CTGATGCGTC CGGCTGGAGA GTTTATGGAG ACCCCGCTGA TCCGGGTAAA AGGTAGCAGG ACGCTGGCGG ATATTGCGGT ACTGCTCCAT CGCGGCCGTG AAATACCACA CATCCTGGTC CTCGAAGGGA CGCAACCCCG TGCGGTACTG ACCGCCCCGC GCGTGCGTGA GCTGCTGCGA CACCGACAAA CCTCGACCCC CATAGGGAAT TTTGCCAGCG AGGATTGGTT TAGTGTTCCT GTGGATTGCC AAATATATGA CTTGGTCGCC AGATTCCGTG CCACCCATCA GGAATGCGCG CTACTCTGCC GGATCGATCC CCCGGAACAT CACGAAGATG TTATCGCTAT TGTGACGATT GAGGATGTGC TGGCCTACAC CTCCCTGCCC ATGCGCTTGC TACGCCCTCA CGCGGCGCAA TGA
|
Protein sequence | MFRTNPAFHL VLAFFVGIVA GLGAVAFRRL IGLMHNAFFF GQISSRFDDL RHSAASFWGL GVVLVPVLGG LVVVWLVRTF APEAKGHGVP EVMDAIYYGS GVIRPVVVLV KALASSISIG SGGSVGREGP IIQIGAAFGS SLAQWLRLQE WQRLGLIAAG AGAGIAATFN TPVGGILFAI ELMLVEVSAR TLVPVMIATG TAAFVSRLFL GDYPSFIISQ HIINRTMHQS AGAYAAYVLL GLLAGGAGLL FTSSLYWTED RFERWIKNPY ARHAAGMLGV GLVIYFMITF TGHYYVEGVG YATVQDVLDG AITHPGFLLL LLLLKILTFS VTLGSGGSGG VFSPSLYVGA VLGGLYAVIA NHLLPGIGIS MTIAAALGMA GMVAASTGAA VTGAVMIFEM TSDYHIIIPL IIVASLAFGV RRLITRETIY TRKLIRRGHF IPEARHSNLY LMRPAGEFME TPLIRVKGSR TLADIAVLLH RGREIPHILV LEGTQPRAVL TAPRVRELLR HRQTSTPIGN FASEDWFSVP VDCQIYDLVA RFRATHQECA LLCRIDPPEH HEDVIAIVTI EDVLAYTSLP MRLLRPHAAQ
|
| |