Gene AFE_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0796 
Symbol 
ID7134595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp722206 
End bp723399 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content59% 
IMG OID643529202 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_002425284 
Protein GI218668137 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.347962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACCGG TGCTCGTATC ACGATTCACC GCGACAAGCT GTATCGGACG CGGTCTGGAC 
CAAACCCTTG CTGCACTGCT TGATCGCCAA AGCGGGCTGA AGCCGTGCGC CTTCCAGGGT
ATCGACATCA ACACCTGGGT CGGCGAAGTG GATGCGGTTG ACGACGAGGA AATGGAACCG
GGGCTGCGAG ACTTTAACTG TCGTAACAAT AGGTTGGCGC AGTTAGCCCT GCGCCAGGAC
GGATTTGCCG AGGCAGTGGA TACTGCCGCC AGCAAATGGG GCCGAAGGCG GATCGGCGTT
TTCCTGGGGA CCAGCACCGC GGGCATTCTG CAGACCGAAT GGGCGTTTCG GCATCTCGAC
CCCGTTAGCG GATGCCTGCC AGCGGATTTT GTCTATGCCG CCACCCACAG CCCATACTCT
CTAAGCGACT TCATCCGGCG AAAATTGCGC CTCGAAGGTC CGGCCATGTC GGTGTCTTCC
GCCTGCTCCT CCAGCGCCAA GGTCCTCGCC TCGGCAAAAC GTATGCTGGA CGCTGGATTG
ATTGATGCCG CCGTAGTCGG CGGCGTAGAC TCATTATGTG CGACCACCCT CTACGGTTTT
CATTCGCTGG GGCTGTTGGC CGACGGCCCC TGTCGACCAT TCAGCGACGA TCGTAAAGGT
ATTTCCCTCG GCGAGGCCGC CGCCTATCTG TTGCTAGAAC GCATGCCGGG CAGTCCCGAC
AGCGATGCGG TGCTTTTGTT GGGTGTGGGT GAATCCAGCG ATGCCTATCA CATGTCATCG
CCTCACCCCG ACGGTCTGGG AGCGCGCATG GCCATGGAAC AGGCGTTGTC TTCGGCCGGA
TTGAGCCCTG CAAGTATTGA CTATATCAAT CTGCACGGCA CCGCCACTCT CAACAATGAT
TCGTCCGAGG CCAAAGCAGT AGCCGGAGTC TTCGGTGCCA CAACACCGTG CAGCTCTACC
AAAGGTGCTA CCGGCCACAC CTTAGGTGCC GCCGGAGCGC TGGAGGCCGT CATCTGTGCC
ATCGCCATCC AACATGACCT GATGCCGGCG GGTCCGGAAG CCGGCCAGAG AGATACCACG
ACTGGCATTC AATATCTCAT GTCAAACCAA CGGCAAAGGG TTTCCCATAT ATTAAGCAAT
TCCTTCGGCT TTGGTGGCAG CAACTGCAGT CTGGTCTTCG GCCGTTCCGC CTAG
 
Protein sequence
MPPVLVSRFT ATSCIGRGLD QTLAALLDRQ SGLKPCAFQG IDINTWVGEV DAVDDEEMEP 
GLRDFNCRNN RLAQLALRQD GFAEAVDTAA SKWGRRRIGV FLGTSTAGIL QTEWAFRHLD
PVSGCLPADF VYAATHSPYS LSDFIRRKLR LEGPAMSVSS ACSSSAKVLA SAKRMLDAGL
IDAAVVGGVD SLCATTLYGF HSLGLLADGP CRPFSDDRKG ISLGEAAAYL LLERMPGSPD
SDAVLLLGVG ESSDAYHMSS PHPDGLGARM AMEQALSSAG LSPASIDYIN LHGTATLNND
SSEAKAVAGV FGATTPCSST KGATGHTLGA AGALEAVICA IAIQHDLMPA GPEAGQRDTT
TGIQYLMSNQ RQRVSHILSN SFGFGGSNCS LVFGRSA