| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0788 |
|---|
| Symbol | |
|---|
| ID | 7135548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 714875 |
|---|
| End bp | 716194 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643529194 |
|---|
| Product | non-heme halogenase, putative |
|---|
| Protein accession | YP_002425276 |
|---|
| Protein GI | 218666522 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.702938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAA ATGAAATGTC CACTTTGGCT CCGGCAGCGC AAATCTGTGA CGTCCTGGTG
ATCGGCGGAG GGCCGGCGGG CTCCACGATC AGTGCGTTAC TGGCAGGGCG GGGCTACCAG
GTGACCGTTC TGGAAAAGGC GTACCATCCC CGCTTCCATA TCGGTGAATC GCTACTTCCG
GCCAATTTAC CCCTATTGCG GGAATTGGGT GTTGCAGAGG AAATCCGGCG CATCGGCATG
GAAAAATGGG GGGCGGAGTT CAATTCGCCT TACCATGCAG AGAAGATGCA GACCTTTTCT
TTTGCCGACG CATGGGACAA ATCCATGCCG ATGGCGTATC AGGTGCGGCG TTCCGAATTC
GACGAGATCC TCATTCGCAA TGCAGAGCGA AAAGGCGCCA AGGTCATGGA AGGTTGTCGC
GCGAACGCTG TGGAGTTTCT GCGCGATAAC GCCGGGGTGC TGGTCCATGC GCAGCACGGA
GATGACCGCC AGGAAACCTG GCAGGCACGC TTCCTGGTGG ATGCATCCGG CCGCGATACG
TTCCTGGGCA ATCGTCTCAA ATCCAAACGC CGCAACTCCA AGCATAATGG CTCCGCCCTC
TACGCGCATT TTCGCGGTGC CCAGCGCCTT GGCGGCAGGG AAGAAGGAAA TATTTCGTTA
TTCTGGTTTG AGCACGGGTG GTTCTGGTTC ATTCCCCTTG CGGATGGAAC GACCAGCGTA
GGGGCCGTGG TGTGGCCGTA CTACCTCAAA TCCAGAAGCA AACCGGTAAA CGAGTTTTTT
CAGGAAACCA TCGAAATGTG CCCTGCCCTC GCAGCACGGC TGGTGAATGC CCAGCGCACT
ACCGATGTCG AGGCCACCGG CAACTACTCC TACGCTTGCG ATCAAACCCA TGGGCCCAAC
TATCTGCTGC TGGGCGATGC ATTTGCTTTT ATCGACCCGG TTTTTTCTTC GGGGGTCATG
CTGGCGATGC AAAGCGCATT CATCGGCGCC GAGACCATCG ACACGTGCCT GCGTGAGCCG
CAGCGCGCGG CGCGGGCGCT CAGGGATTTC GATCGCCGGG TGCGCCACGG CGGCAAGGTT
TTTTCCTGGT ATATTTATCA CATCAGCCAA CCCGCCATGC GCGATATGTT TATGCGCTCG
AATAACGTGC TGAGGGCCAG GGAGGCGGTA CTCTCGGTCC TTGCCGGAGA TATTTTCAGG
AAGACGCCGA TTTGGCCCTC TCTTGCCGTC TTTAAGGGTA TTTATTACTT GTCTTCCCTG
CGTCATGCAC GTCGTTCATG GGCAGCCTGG AAGCGGCGTA AAGAAGACAT ACGAGTATAG
|
|---|
| Protein sequence | MGKNEMSTLA PAAQICDVLV IGGGPAGSTI SALLAGRGYQ VTVLEKAYHP RFHIGESLLP
ANLPLLRELG VAEEIRRIGM EKWGAEFNSP YHAEKMQTFS FADAWDKSMP MAYQVRRSEF
DEILIRNAER KGAKVMEGCR ANAVEFLRDN AGVLVHAQHG DDRQETWQAR FLVDASGRDT
FLGNRLKSKR RNSKHNGSAL YAHFRGAQRL GGREEGNISL FWFEHGWFWF IPLADGTTSV
GAVVWPYYLK SRSKPVNEFF QETIEMCPAL AARLVNAQRT TDVEATGNYS YACDQTHGPN
YLLLGDAFAF IDPVFSSGVM LAMQSAFIGA ETIDTCLREP QRAARALRDF DRRVRHGGKV
FSWYIYHISQ PAMRDMFMRS NNVLRAREAV LSVLAGDIFR KTPIWPSLAV FKGIYYLSSL
RHARRSWAAW KRRKEDIRV
|
|---|
| |