| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0748 |
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| Symbol | psd |
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| ID | 7137004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 675855 |
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| End bp | 676517 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643529154 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_002425236 |
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| Protein GI | 218665734 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACAG ACTATCCATA TCCGGTGCTG GCGCGCGAGG GCTGGCCTTT TATCGCGCTC
TTTCTGGGCG TGGCCATCGT GCTCCAGGTG CTCACCAACA GTTGGTGGGC ATTGCCCTTC
TATCTGCTTT TTCTCTTCAG TCTCCAGTTT TTCCGTGACC CGCGGCGACC GTTGCCCACC
TTGTCGGAGC GATCGGTGCT GTGCCCGGCC GACGGCAAGG TAATCGCCAT TGAGCAGGTC
GAAGACCCCT ATCTTTCCCG TCCCGCGCTC AAGATCAGCA TTTTTATGAA CGTGTTCGAT
GTGCACGTCA ATCGCATGCC GGTCAGTGGA CAGGTGCAGA AAGTCTGGTA TTTCCCGGGT
AAGTTCTTCA ATGCCGCGCT TGACAAGGCA TCTCTGGAGA ACGAACGCAA CGCCCTGTGG
GTCAGGACGG GCGACGGCAG CGATGTGACC GTCGTGCAGG TGGCAGGCCT GGTCGCGCGA
CGTATCGTCT GTTATGTCGC TGCCGATGCG GCAGTGGTGT CGGGGCAGCG CTTCGGCTTT
ATCCGCTTCG GTTCGCGGGT GGACACCTAC TTGCCGCTGG GTGCCCAGCC TTTGGTGGCC
ATAGGAGAGC GGGTCCGTTC TGGCGCCCAG TGTATTGCGA CCTTGGGCGT GCGGCAGGCA
TGA
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| Protein sequence | MKTDYPYPVL AREGWPFIAL FLGVAIVLQV LTNSWWALPF YLLFLFSLQF FRDPRRPLPT
LSERSVLCPA DGKVIAIEQV EDPYLSRPAL KISIFMNVFD VHVNRMPVSG QVQKVWYFPG
KFFNAALDKA SLENERNALW VRTGDGSDVT VVQVAGLVAR RIVCYVAADA AVVSGQRFGF
IRFGSRVDTY LPLGAQPLVA IGERVRSGAQ CIATLGVRQA
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