Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0744 |
Symbol | |
ID | 7134196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 670768 |
End bp | 672306 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643529150 |
Product | MutS domain V protein |
Protein accession | YP_002425232 |
Protein GI | 218667855 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGCTG ACCTCAAGCC CCTGGAATTC GAGGGTATCC GCCGGCTGCT CGAAAGGCTC TGCGCAACGC CTTTCGGGGC CGATGCCGCG CGCAATATTG CCCCCGCCCC AACGCTGATG GCCGCCCGCC AGTTGCAGGC GGCCATCGCC GCCGCCCGCC TGGGCCTGGA ATCCGGTGAA GGCCCAGTCC TCCCGGATCT GCCGGATGTA CGGGCTGCCA TCCGCCAGGT GGCGTCGCCC GGGGCGGCGC TGGCCGGCAC CGCCTTTCGC AACCTCGCAC TGTTGTTGCG CGTCGGCGTG CAGTTGCGGC CTTACGTGGA AAACCGCCCG GCGCTTCTGC CCGCCGGCCC GGAGCGCCTG GATGCGGCAG CGGACCTGTT GCCGCGGATG GACGCCGTAC TCCTGCCCAA CGGCAACGTG CGCGAGGATG GTAACGAGGC GCTGCGCCGA CTGCATGGTG AACTGAGGGC GGAGCGCGAA CAGATTCAGA AAACCCTGCA GGGACACCTG CGGGTAGCGG GAGCGAAGAT CCACTGGGCC GGTCAGCGTG CTTGCGTGCA TTTGCCCGAT GGGGCGGTGG ACAATATTCG CGGAGTGCGG CGCGGCACAG GTCCTGGTGG GCATGGTGTC CTGGTAGAGC CGATGGAGAT GGTGGCGGGC AACAACCGGC TGGAGAAGCT CGCCGGCGGT ATCGAGCAGG AAAACCAGGC CGTCCTCCGT GCCCTCAGTG ACGCGGCACG CGACCGTCTG AGCGGCCTGC AGCATCTGGT GGAGTCACTC ACCTGGCTGG ATCTCGCCAT CGCGGGCGCG CAACTGTCCA TCCATCTCCA TGGCAAAGCG GCGGAGATGG TGGATGAGCC GGTGCTGTTG CTGGAAGGGG CTTATCATCC ACAACTGATC CTCGCCTATG CGGAGAAGCA TGGCCCCCAG CCCCGGCCGC TATCGGTGCA TATCGATGCG GAGTGCCCGA TTCTGGTGGT GACCGGACCC AATACGGGCG GCAAGAGCGT TTCGCTGAAG ACGGTCGGAT TGCTCACGGT GATGGCCCAC TGCGGTTTGC ACATTCCGGT AAGCGGGCGC GCCGTGGTCG GAAATTTCAC CCGCATTTTT GTGGATATGG GCGATCCGCA GAGCGTCGCT TTTGCGTTGT CTACCTATTC CGGCCATGTA GAGGTTCTCA AGAGACTGCT TACGGATGCG GATGACCATA CCCTTATCCT GCTCGACGAA CTGGGTACTG GTACGGACCC GGAGGAGGGG GCTGCGCTGG CGATGGCGGT GCTCGACGAC CTGGCGGGAC GCGGAGTGCG CGGGATGGTG ACGACCCATC TCACGCCGCT CAAGGCCTTT GCGGATGCCC ACTCTTGTCT GCGTAACGCC TCCATGCGCT TTGATCAGGA GCGCCTGGAG CCCACCTATG ATCTGCAGAT CGGCGTGCCG GGGTCTTCCA TGGGGCTGGT CATCGCGGCT CGGCGCGGGC TACCTGATGC GTTGATCCGC AAGGCACGCG CTTATCTGGA GTCTCTGCAC AACCGGTAA
|
Protein sequence | MEADLKPLEF EGIRRLLERL CATPFGADAA RNIAPAPTLM AARQLQAAIA AARLGLESGE GPVLPDLPDV RAAIRQVASP GAALAGTAFR NLALLLRVGV QLRPYVENRP ALLPAGPERL DAAADLLPRM DAVLLPNGNV REDGNEALRR LHGELRAERE QIQKTLQGHL RVAGAKIHWA GQRACVHLPD GAVDNIRGVR RGTGPGGHGV LVEPMEMVAG NNRLEKLAGG IEQENQAVLR ALSDAARDRL SGLQHLVESL TWLDLAIAGA QLSIHLHGKA AEMVDEPVLL LEGAYHPQLI LAYAEKHGPQ PRPLSVHIDA ECPILVVTGP NTGGKSVSLK TVGLLTVMAH CGLHIPVSGR AVVGNFTRIF VDMGDPQSVA FALSTYSGHV EVLKRLLTDA DDHTLILLDE LGTGTDPEEG AALAMAVLDD LAGRGVRGMV TTHLTPLKAF ADAHSCLRNA SMRFDQERLE PTYDLQIGVP GSSMGLVIAA RRGLPDALIR KARAYLESLH NR
|
| |