Gene AFE_0737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0737 
Symbol 
ID7136174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp666787 
End bp667440 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content56% 
IMG OID643529143 
Productfimbrial assembly protein PilO, putative 
Protein accessionYP_002425225 
Protein GI218666007 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0931975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTTG ACGAACTCCG CAATCTGCAA ATCGACGACA TCGTCCGCTG GCCCGCCAAA 
ACCAAACTCG TCGCCATCGT TATCATCGTC CTCATATTCG GTATCCTGGC CTGGTTTGAG 
TTCATCTCAC CCGAGAACAA CCAATACAAT CAGCTAAAAA CCCAGGAAGA CAGCCTGAAG 
ACCCAGGTGC GGCAAAAACA GTTGCTGGCC GCCTCCCTGC CCGCCTACCA AGCCCAGATC 
AAAGAAATGA ACCGGCGTTT TCAGGACTTT CTGCAGCAGT TGCCCAACCG CACCCAGATC 
CCCTCCTTGC TGGATGACGT GACCCTGGCG GGACGCAGCC GCGGGCTGGA TTTCGAACTC 
TTCCAGCCGA CCAGTGAGGT CAACAAAAAC TTCTACGCGA AGATACCGGT AAGGCTCAAA 
GTGGTCGGTA CCTACAATGA TATCGGCCGC TTCGCCGCTG CGGTGGCCGC CATGCCCCGT 
ATCGTCACCA TCAACGATAT CGACATTGCG CGGATGCCTG ATGTGGGTAC GACCAGTCTC 
GCCAAGGCGC AGGCTTCCCA GAAACTGGTC ATGCAGTGCA CGGCAACCAC CTATCGTTAC 
CTGGATAACC GGGACAATGC CGGTGGCCGG GGCAAGAATG GGGGCAAGTC ATGA
 
Protein sequence
MTFDELRNLQ IDDIVRWPAK TKLVAIVIIV LIFGILAWFE FISPENNQYN QLKTQEDSLK 
TQVRQKQLLA ASLPAYQAQI KEMNRRFQDF LQQLPNRTQI PSLLDDVTLA GRSRGLDFEL 
FQPTSEVNKN FYAKIPVRLK VVGTYNDIGR FAAAVAAMPR IVTINDIDIA RMPDVGTTSL 
AKAQASQKLV MQCTATTYRY LDNRDNAGGR GKNGGKS