Gene AFE_0733 details

Gene Information

• Locus tag: AFE_0733
• Symbol: aroB
• ID: 7134504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 662107
• End bp: 663201
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643529139
• Product: 3-dehydroquinate synthase
• Protein accession: YP_002425221
• Protein GI: 218665639
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAGTC TTTGCGTCGA TCTGGGTCAG CGCAGTTACC CCATTCACAC CGGCACAGGC 
ATTCTCGCCG ACTCCGCGCT CTTTGCGCCA GCTCTGAGCA AAGGTCCTGT GGCGGTCGTC 
ACGGACAGCA ATGTCGCGCC CCTCTATCTG GAGACCCTGC AAAAGACCCT CAAGGCCCTG 
GACAAGCCGT CGCTGAGCAT CATCCTGCCA GCTGGCGAAG AGAGCAAATC CCTGGACAAC 
ATCCAGGAAA TCGCCGGACG CCTGTTGAGC GCAGGGTACG GTCGCGACTG TACCCTGTGC 
GCCCTCGGCG GCGGGGTCGT GGGGGACATC ACCGGTTTTG CCGCGGCGGT CTATCAGAGG 
GGGGTGGCCT ACATTCAGGT GCCGACCACC CTGCTCGCCA TGGTGGACTC CTCGGTTGGC 
GGCAAGACCG GGGTCAACCA CCCCCTCGGC AAGAACATGA TCGGCGCTTT TTACCAACCG 
CAGGCAGTGA TCGCCGACAC CGACACCCTG GACAGCCTGC CCGAACGGGA ATTCCGTTCG 
GGCCTGGCAG AAGTGATCAA ATATGGCCTC ATCAACGATC AGGGCTTTTT CTCCTGGCTC 
GAAGATCACA TGGATGCAGT GCTGGCCCGG GAGCCGGACG CCCTGACCAA AGTGATCCGG 
CACTCCTGCA AGGACAAGGC GGATATCGTG GCGCGCGACG AACTGGAAGG CGGGCTGAGG 
GCCATTCTCA ACCTTGGACA CACCTTTGGT CACGCCATCG AGGCGGCGAC GGGCTACGGC 
CAGTACCTGC ACGGTGAGGC GGTGGCCATC GGCATGGTCA TGGCGGCGGA TCTGTCGCGT 
CGCCTGGATC TGATCCGGGA AAGTGAGCAG GATCGCATCT ACGCCCTGGT CGAAGCCACC 
GGATTGCCCA CCCTGGCCCC GGCCCTCCCT GTCGCCGACT ATCTCGGCTT CATGCGCGTC 
GACAAGAAAG CGGAGGGGGG GCGGGTGCGC TTCATCCTGC TGCGCGGCAT CGGGAGTGCG 
GTCATCACCG GAGAGGTTCC CCCGGCCGCT ATCACTCAAA CCCTTCAGGC GTTCATGGAG 
CACGGACATG CATGA 

 

Protein sequence

MRSLCVDLGQ RSYPIHTGTG ILADSALFAP ALSKGPVAVV TDSNVAPLYL ETLQKTLKAL 
DKPSLSIILP AGEESKSLDN IQEIAGRLLS AGYGRDCTLC ALGGGVVGDI TGFAAAVYQR 
GVAYIQVPTT LLAMVDSSVG GKTGVNHPLG KNMIGAFYQP QAVIADTDTL DSLPEREFRS 
GLAEVIKYGL INDQGFFSWL EDHMDAVLAR EPDALTKVIR HSCKDKADIV ARDELEGGLR 
AILNLGHTFG HAIEAATGYG QYLHGEAVAI GMVMAADLSR RLDLIRESEQ DRIYALVEAT 
GLPTLAPALP VADYLGFMRV DKKAEGGRVR FILLRGIGSA VITGEVPPAA ITQTLQAFME 
HGHA