| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0728 |
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| Symbol | hemE |
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| ID | 7136994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 653053 |
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| End bp | 654117 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643529134 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002425216 |
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| Protein GI | 218667464 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCA CCCTGCAGAA TGACAATTTC CTGCGCGCCT GCCTGCGTCA GCCGGTGGAT
CACGTACCCG TCTGGCTGAT GCGTCAGGCC GGGCGGTACC TGCCGGAGTA CCGTGCCACT
CGCGCCCGTG CTGGCGATTT TCTCAGCCTC TGCACCACGC CGGAACTGGC CTGCGAGGTC
ACTTTACAGC CCATCGACCG CTTCCCCCTG GATGCCGCCA TCCTTTTTTC GGATATCCTG
ACCATCCCCT ATGTCATGGG ACTCGGGCTG GAATTTCAGG AAGGGGAAGG TCCGGTTTTT
GCGCGCCCCT TGCGCAGCGC TGCCGACATC TCCGCACTCA GCCAGCCCGA TCCGGAAACG
GAGTTGCGCT TTGTGATGGA CGCTGTGCGG CTCATCCGCC GCGAGATCGA CGGACGTGTG
CCCCTCATCG GTTTTGCAGG CAGTCCGTGG ACCCTCGCCT GCTATATGAT CGAAGGGCGC
GGCAGCCGCG ATTTCATCCA CATCAAAGGG CTGCTGTACA GCGATCCGGC GCTGCTGCAC
CGGCTGCTGC GCCATCTGGC GCAGTCGGTG ACCAGCTACC TCAACGCTCA GATTGCCGCG
GGTGCCCAGG CGGTAATGAT TTTCGATACC TGGGGCGGCA GCCTCAGTAC CCCTGCGTAT
GCGGAGTTCT CCCTCGCCTA TATGAGTGAG ATCGTCGCCG CTTTGCAGCG CGAAGCCGAA
GACCGCCGAG TGCCGGTCAT ACTCTTTACC AAGGGCGGAG GCAACTGGCT CGAGGCCATG
GCCGCGAGCG GCGCCGATGC ACTTGGCCTC GATTGGACGA CGGAATTGGG CCACGCCCGC
CAGCGTCTGG GTAACAGCGT TGCGCTACAA GGTAACATGG ACCCCATCGC CCTCTACGGC
AGCCCCGAAG GGATTGTCAG GGAAGCGACG CGCATTCTGG AAAGCCACGG ATCGGGGACC
GGTCATATCT TCAACCTCGG CCACGGCATC ACCCCGCAGA CCCCCGTTGA ACATGTTGCC
ATTCTTGTCG AAAGCGTGCA GAGCTGGCGA CCGAAGACCG CCTAG
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| Protein sequence | MSATLQNDNF LRACLRQPVD HVPVWLMRQA GRYLPEYRAT RARAGDFLSL CTTPELACEV
TLQPIDRFPL DAAILFSDIL TIPYVMGLGL EFQEGEGPVF ARPLRSAADI SALSQPDPET
ELRFVMDAVR LIRREIDGRV PLIGFAGSPW TLACYMIEGR GSRDFIHIKG LLYSDPALLH
RLLRHLAQSV TSYLNAQIAA GAQAVMIFDT WGGSLSTPAY AEFSLAYMSE IVAALQREAE
DRRVPVILFT KGGGNWLEAM AASGADALGL DWTTELGHAR QRLGNSVALQ GNMDPIALYG
SPEGIVREAT RILESHGSGT GHIFNLGHGI TPQTPVEHVA ILVESVQSWR PKTA
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