| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0697 |
|---|
| Symbol | |
|---|
| ID | 7137307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 625364 |
|---|
| End bp | 626473 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643529103 |
|---|
| Product | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|---|
| Protein accession | YP_002425185 |
|---|
| Protein GI | 218665477 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTTC GCGCAGCAGT CGCCTTTGAG GCGGGTAAAC CACTGGTCAT CGAAACCGTG
CAACTGGACG GTCCCAAGGA GGGGGAGGTA CTGGTGGAGC TCAAGGCCAC CGGCATCTGC
CACACCGACC ATTTTACCCT TTCCGGTGCA GATCCCGAGG GCCTGTTCCC GTGTATTCTC
GGCCATGAAG GCGCCGGGAT CGTCGTTGAC GTTGGCCCGG GTGTGAAGAG TGTCAAAAAG
GGCGACCACG TCATTCCCTT GTATACTCCG GAATGTCGCG AATGCGAGTA TTGTCTTTCG
CGCAAGACCA ATCTCTGTCA GAAGATTCGG ACGACCCAGG GGAAGGGACT GATGCCCGAC
GGGACGACGC GCTTTTCGTT CAAAGGCAAG CCGTTGTTCC ATTACATGGG TTGTTCGACC
TTCGCCAATT ATACCGTGAT GCCCGAAATC GCCTTGGCCA AAATTCGGGA GGACGCCCCC
TTTGACACCA CCTGCTATAT CGGCTGCGGG GTAACCACGG GCATTGGTGC CGTGGTGTTT
ACGGCGAAGG TGGAACCGGG TGCCAATGTG GTGGTTTTTG GACTGGGCGG CATCGGCCTG
AATGTGATTC AGGGCGCCAA ACTGGTGGGC GCCAACATGA TCATCGGGGT GGACATCAAC
CCGGCCCGGG AGGCCATAGC CCGGAAGTTC GGCATGACGC ATTTCGTCAA TCCGAAGGAG
GTGGAAGGCG ACCTCGTATC CCATCTGGTC GAACTGACTC ATGGTGGTGC GGATTACAGC
TTCGAGTGCA TCGGTAATGT AAAAGTCATG CGTCAGGCCC TGGAGTGCTG TCATAAAGGC
TGGGGTGTTT CCTGCATCAT CGGTGTTGCC GGCGCCGGCC AAGAGATATC GACCCGCCCC
TTCCAGTTGG TTACCGGACG GCGGTGGATC GGCAGTGCGT TCGGCGGCGC CCGCGGGCGT
ACCGACGTTC CGAAAATAGT CGACTGGTAC ATGGAGAAGA AGATCAATAT CGACGACCTG
ATCACTCACC GCCTCAAGCT GGAAGATATC AACGAAGGGT TCCATCTTCT GGAAACGGGG
CAATCCATTC GCAGTGTGGT GGTGTATTGA
|
|---|
| Protein sequence | MDVRAAVAFE AGKPLVIETV QLDGPKEGEV LVELKATGIC HTDHFTLSGA DPEGLFPCIL
GHEGAGIVVD VGPGVKSVKK GDHVIPLYTP ECRECEYCLS RKTNLCQKIR TTQGKGLMPD
GTTRFSFKGK PLFHYMGCST FANYTVMPEI ALAKIREDAP FDTTCYIGCG VTTGIGAVVF
TAKVEPGANV VVFGLGGIGL NVIQGAKLVG ANMIIGVDIN PAREAIARKF GMTHFVNPKE
VEGDLVSHLV ELTHGGADYS FECIGNVKVM RQALECCHKG WGVSCIIGVA GAGQEISTRP
FQLVTGRRWI GSAFGGARGR TDVPKIVDWY MEKKINIDDL ITHRLKLEDI NEGFHLLETG
QSIRSVVVY
|
|---|
| |