| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0693 |
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| Symbol | |
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| ID | 7134770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 622336 |
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| End bp | 624267 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643529099 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_002425181 |
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| Protein GI | 218667485 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATG ACTATATAAC CCATGCCTGG GATCGTTGCA CCGGACAATA TCGGTTGGAC
GTGAATGGTG CCCCGGAACT GCAAAGACTG GATGCGGGCA ACCTCGGGCG ACTGCTCGAG
GAACAGCATC TTTTTGTAGA GATCGGATCT GCGGAAATGA CGCGTCTGAT TAAACAGACG
TTGCGATTTT CCGAGGATGC CATGCTGCCG TCACCAGATT GTACATTGCT GTTGCTGGAT
GCCGGCGGTG TTGCTCTGCA CGCTGTCGGA ACGGAACTCG AGAGCGGACG TGATGCCCGC
TATTCGGGTA TGGACGCCGG ATTCATATGG CGGGAAGAGT ATGTCGGGGT GACCGGACCG
AGCCTTTGTC TGCATGACAT GAAGCCCCGC ATGGTCCACC GGGAGGAGCA TTTATTTAGG
AACTTTGTGG AGATGGCGTG CTGCGCGATG CCTATTTGGG CGCCATCTGG CGCACTGCTG
GGGGTGATCG ATTCAACCTA TTCCCGCAGC GGTTATGCGA AGTCGGCATA TGTCTCGGTC
ATGCCGCTGC TGGCGCAACT GGCACGGCGG ATCGAAATGA AATATTTCGC CCGGAATTAT
CAGGACCATG TCATTCTGTC GGTGAACAGG CTGAACGACT ATACCGACCA TGATGATGAA
GCATTGTTTG CAATTAACGA GAATGGCGTC ATTGTTGCGG CGGAATTCGC GCTGACGAAA
GGCACTATCG GTGATGCCAA GGGCGGTCTT GTTGGTGCGA ACTTGCGGGA TGTGTTCGAC
GTTTCGCTGG ACAAGATGCT GGACGATCAC CATCGTGCCG AAAAGTCGCA CTCCAGAACC
CTGCTCCGGA ATACCGGAAG GCATGATGGT CTGCGGGTAT TTTCGCTGCC GGACAAAGTG
TCGTTCACGG CTGTCGTGAA CGGTATTCTC CGGAATACAC CGCATTCCAG GGACGAAGCT
TCGGTTCAGG TGCATGATTC CCTGTTGGCG TTGTCGGGCG ATGACGCGGT GGTATCGGAG
AATATTCGTC GTATCCATAA AGTATTGAAC AAAAACATCA GTATTCTGCT ACTGGGCGAA
ACCGGCACTG GCAAAGATAC CCTTGCGCGC GCCATACACC GCGCCAGCGA TAGAAGAGAT
AAACCTTTTG TTGCGATCAA TTGTGCAGCC ATACCCGAAT CGCTCATCGA GAGCGAGCTA
TTCGGGTATG AGCCCGGCTC CTTTACCGGG GCGAGTCGCG TGGGCAAGCA GGGTAAGGTG
ATGGCCGCCA ATGGTGGCAC GCTGTTCCTC GATGAAATCG GAGACATGCC CGCCGCGCTT
CAGGGGCGTC TGCTGCGAGT TCTCGAAGAA CGGGAGGTTA CCCCCCTTGG TACCACCAAA
GCCAGCCCCG TAGATATTCG GGTGATCAGT GCAACCAATA AGTCGATCAA TGATCTGGTG
CAGCAGGGAG GCTTTCGGAC TGACCTGCTT TATCGGATTA ATGATGTCGT GCTAAGCCTG
CCGCCACTGC GGGAACGGAG CGATAAAATC CGGCTCGTGG AAACCATTTG TCAACAGGAA
TGTGGCGTAT CTGAAATGGA GATATCAGCG GAAGTATGGA ATATTTTTCT GGGTTATTCC
TGGCCTGGTA ATATCCGCGA ACTTCGTAGT GTGATTCGTA CTGCCCTGGC GCTGAGTGAT
GGTAATGCCA TCCGCTGCGA AGACCTGCCG GAACGGCTGG TGACCGGCGA AAGGGCCGGT
GGCCGCGTAA CAACGGCACC GGCGACCACA CCACCATGGA GCGATAGCGA CGCGCTGGAG
CGGAACAGAA TCCTCGCGGA GTTGGAGCGT CACCACTGGC GGGTGATCGA TACCGCGAAA
TTCCTCAAGG TCAGTCGTAA TACTTTGTAC CGTAAAATGC GCCTGTATGG CATTATGGAC
GCTGACGCAT AA
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| Protein sequence | MDNDYITHAW DRCTGQYRLD VNGAPELQRL DAGNLGRLLE EQHLFVEIGS AEMTRLIKQT
LRFSEDAMLP SPDCTLLLLD AGGVALHAVG TELESGRDAR YSGMDAGFIW REEYVGVTGP
SLCLHDMKPR MVHREEHLFR NFVEMACCAM PIWAPSGALL GVIDSTYSRS GYAKSAYVSV
MPLLAQLARR IEMKYFARNY QDHVILSVNR LNDYTDHDDE ALFAINENGV IVAAEFALTK
GTIGDAKGGL VGANLRDVFD VSLDKMLDDH HRAEKSHSRT LLRNTGRHDG LRVFSLPDKV
SFTAVVNGIL RNTPHSRDEA SVQVHDSLLA LSGDDAVVSE NIRRIHKVLN KNISILLLGE
TGTGKDTLAR AIHRASDRRD KPFVAINCAA IPESLIESEL FGYEPGSFTG ASRVGKQGKV
MAANGGTLFL DEIGDMPAAL QGRLLRVLEE REVTPLGTTK ASPVDIRVIS ATNKSINDLV
QQGGFRTDLL YRINDVVLSL PPLRERSDKI RLVETICQQE CGVSEMEISA EVWNIFLGYS
WPGNIRELRS VIRTALALSD GNAIRCEDLP ERLVTGERAG GRVTTAPATT PPWSDSDALE
RNRILAELER HHWRVIDTAK FLKVSRNTLY RKMRLYGIMD ADA
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