Gene AFE_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0680 
SymboltrmU 
ID7135795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp607040 
End bp608098 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID643529086 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_002425168 
Protein GI218666259 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATA AAAAAGCCCT CATCGCCCTC TCGGGAGGAG TGGATTCCGC CGTGGCGGCC 
CTGCTCATGC AGGGGCAGGG CTACGAACTC ACCGGCGTGA CCATGCGCCT GTGGCCCAGG 
AGCCGCTGCT GCGATGAAAA AGATATCGAA GACGCCGCCG AGATCTGCGC CCGTCTGGGG 
ATTCCCTACA CGGTGCTGGA TTATCGCGAG GCGTTCCGAC GTCAGGTGGT CGACGTATTT 
GTCGCCGAAT ATCAGGCGGG GCGTACGCCC AATCCTTGTG CGCGCTGCAA TCAGTTCCTC 
AAGTTCGATG CTTTGCTGGC GGAAGGCGAA AAGTTGGGCG CCACGATGCT GGCGACGGGC 
CATTATGCGC GGCTGGCGGA AACCTCCTCG GGTACTGCTC TGCTGCGTGG CCGTGACCAT 
GCCAAAGATC AATCCTATTT TCTTTTCGCC ATTGGCGCGG GGATACTGTC CCGCCTGCGC 
TTTCCCGTGG GTGGCATGAA CAAGGACGAG GTGCGCGCCA TGGCCCGTAA GCATGGCCTG 
CCCGTGGCCG CCAAGCAGGA CTCACAGGAT ATCTGCTTTG TCCCGGACGG CGACTACCGC 
CGCTTTCTGG AGGATTACGC CGGGCTGGAC ATGGCGCAGG AAGGAGAGAT GGTTGACAGC 
AGCGGGCAGG TGCTGGGCCA TCATCCGGGT ACGCTCCACT TCACCGTAGG GCAGCGCAAA 
GGTCTGGGTG GCGGCAGTGA CCAGCCGCGC TATGTCCTTG CGCTGGACCC GGCGCAGAAC 
CGGGTGATTG TCGGAGGTGA GGATGAGCTC TACCGCGGTG TGGTCAGCCT GGCCGAGTGC 
AACTGGCTGA CGGATTTGTC CCCCGGCGAA ACCCACGCCG TGACCGTAAA ACTGCGTTAC 
CGCTCCCGCG CCGAGTCGGC CATGCTGCAT CTGCTCTCCG ATGCCCGGGC CGAACTCCGC 
TTTCGCGAGC CGCAACGCGC CGTTACCCCC GGTCAGGCCG CCGTCTGCTA TCAGGGTGAG 
CGCCTGCTGG GCGGAGGGTG GATTCAGGGC ACGGAATAG
 
Protein sequence
MADKKALIAL SGGVDSAVAA LLMQGQGYEL TGVTMRLWPR SRCCDEKDIE DAAEICARLG 
IPYTVLDYRE AFRRQVVDVF VAEYQAGRTP NPCARCNQFL KFDALLAEGE KLGATMLATG 
HYARLAETSS GTALLRGRDH AKDQSYFLFA IGAGILSRLR FPVGGMNKDE VRAMARKHGL 
PVAAKQDSQD ICFVPDGDYR RFLEDYAGLD MAQEGEMVDS SGQVLGHHPG TLHFTVGQRK 
GLGGGSDQPR YVLALDPAQN RVIVGGEDEL YRGVVSLAEC NWLTDLSPGE THAVTVKLRY 
RSRAESAMLH LLSDARAELR FREPQRAVTP GQAAVCYQGE RLLGGGWIQG TE