Gene AFE_0677 details

Gene Information

• Locus tag: AFE_0677
• Symbol: hscA
• ID: 7136860
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 604628
• End bp: 606493
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643529083
• Product: chaperone protein HscA
• Protein accession: YP_002425165
• Protein GI: 218666307
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTTAA TGCAAATTGC AGAACCGGGC ACGGCCGCTG ATCCCCATCA GCGGCGGCTG 
GCTATCGGTA TCGACCTGGG AACCACCCAT TCGCTGGTGG CCTCCGTATT GTCGGCGGTG 
CCCACCGTCA TGCGCGATCA TGACGGTAAA TATCTCCTGC CTTCGGTGGT GCGCTACCTC 
GGCGGCGGCG GTATTCATGT AGGCTATCCC GCGGTCGCTG CCGCCGGGCA GGACCCGCAC 
AATACCATCG CCTCGGCGAA ACGCCTGATG GGGCGCGGCC ACGGCGATGT GCAAACCCTC 
GCCGGGCACC TACCTTACGA CCTTGTTCCT GGAGAGGGTA TGGTGCGCCT GCGTACAGTG 
GCGGGTGAAA AATCCCCCGT AGAGGTGTCT GCCGAAATAT TGCGGGTGCT CAAAGAGCGG 
GCGGTGGAAA CCCTGGGTGG CGAACCGGAG GGCGCGGTGA TCACGGTGCC CGCTTATTTC 
GACGAGGCCC AGCGTCAGGC CACCAAAGAT GCGGCCCGTC TGGCGGGACT GAACGTGTTG 
CGTCTACTGG CCGAGCCGAC CGCGGCGGCG GTGGCCTATG GCTTGGACAA GGGCAGTGAA 
GGCATTTTTG CCATCTACGA TCTGGGCGGC GGAACCTTCG ATATTTCCAT ATTGCGCCTG 
CAGGCCGGAG TCTTTGAGGT GCTGGCGACC GCCGGTGATT CCGCCCTGGG CGGTGACGAT 
ATGGATCATG CGCTGGCCGA ATGGCTGATG CAGGAGGAGG GCGGCGATGC GTCCGATCCC 
CTCTGGCGGC GGCAGGTGCT GCAGCAGGCG CGTACCGCCA AGGAGGCGCT CAGTGCCGTT 
GCTGAAACGA TGATAGTGCT GACGCCTTCC GGTCGCGCGG CCCGCGAGAT AAAACTGTCG 
CGTGGCCGGT TGGAGTCACT GATTCAGCCG GTGATCCAGC GGTCCCTCCC GGCTTGTCGG 
CGGGCGCTGC GGGATGCCGG TTTAAAGCTG GATGAGATTG AAGGCGTGGT GCTGGTGGGC 
GGCGCCACCC GTGTCCCCGC CGTGCGCGCG ATGGTGGAGG AATTCTTTCG GCAGAAGCCG 
CTGACGGACA TCGACCCCGA TCAGGTGGTG GCCATAGGGG CCGCCATTCA GGCCGATGCC 
CTGGTAGGCA ATCAGCGTGA AGATTTGCTG CTCATGGACG TGCTGCCGCT GTCCCTTGGT 
CTGGAGACCA TGGGCGGACT GGTGGAGAAA ATCATTCCCC GCAATACCCC TATTCCGGTG 
GCACGGGCGC AGGAGTTCAC CACCTTCAAG GATGGTCAGA CGGCCATGAG TATTCACGTC 
GTGCAGGGGG AGCGCGATCT GGTGCAGGAC TGTCGTTCTC TGGCGCGTTT CAGTCTGCGC 
GGCATTCCCC CCATGGTGGC CGGTGCCGCA AGGATTCGCG TGACTTTTCA GGTGGACGCC 
GATGGCCTGC TGGCGGTGCG TGCAGAGGAA ACCAGTACGG GGGTGCGTTC GGAAGTCGTC 
GTCAAACCGT CTTACGGTCT GAATGATGAA GAAATCGCCA GGATGTTGCA GGACTCGTTC 
ATCCATGGCG CCGAAGACGT GGTCAGAAGA CGCCTGTCAG AAGCCAAAGT GGAGGGTGAG 
CGCGTACGCG AAGCCTTGCG TACGGCTTTG GCCGCCGATG CCGACCTGCT GGATCCGGCG 
GAGCGGGAAG CCCTGGACAA GGCCGGTACC GCGTTGACCA ACGCCTTGTC GGGTGACGAC 
GCCGGCGTGA TCACGGCCGC CGCGGAGGCG GTGGAAACCG CCGCAGAACC GCTGGTGCAA 
CGGCGTATGG ACAGTGCCCT ACGCCGCGCC ATCACTGGCC GTTCCATTGA CGAACTGGGA 
GACTGA 

 

Protein sequence

MALMQIAEPG TAADPHQRRL AIGIDLGTTH SLVASVLSAV PTVMRDHDGK YLLPSVVRYL 
GGGGIHVGYP AVAAAGQDPH NTIASAKRLM GRGHGDVQTL AGHLPYDLVP GEGMVRLRTV 
AGEKSPVEVS AEILRVLKER AVETLGGEPE GAVITVPAYF DEAQRQATKD AARLAGLNVL 
RLLAEPTAAA VAYGLDKGSE GIFAIYDLGG GTFDISILRL QAGVFEVLAT AGDSALGGDD 
MDHALAEWLM QEEGGDASDP LWRRQVLQQA RTAKEALSAV AETMIVLTPS GRAAREIKLS 
RGRLESLIQP VIQRSLPACR RALRDAGLKL DEIEGVVLVG GATRVPAVRA MVEEFFRQKP 
LTDIDPDQVV AIGAAIQADA LVGNQREDLL LMDVLPLSLG LETMGGLVEK IIPRNTPIPV 
ARAQEFTTFK DGQTAMSIHV VQGERDLVQD CRSLARFSLR GIPPMVAGAA RIRVTFQVDA 
DGLLAVRAEE TSTGVRSEVV VKPSYGLNDE EIARMLQDSF IHGAEDVVRR RLSEAKVEGE 
RVREALRTAL AADADLLDPA EREALDKAGT ALTNALSGDD AGVITAAAEA VETAAEPLVQ 
RRMDSALRRA ITGRSIDELG D