Gene AFE_0676 details

Gene Information

• Locus tag: AFE_0676
• Symbol: hscB
• ID: 7135061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 604049
• End bp: 604594
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643529082
• Product: co-chaperone Hsc20
• Protein accession: YP_002425164
• Protein GI: 218668123
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGCCCT TCCGCGCGGA CCTGTCCCTG TATGCGGTGG CGGGCCTGCC CGAAACTTAT 
GATCTGGACG TGCAGGCGCT GCGCACCCAA GTATTGGCGC TGCAAAAAGG CCTGCATCCG 
GACCGCTTCG CCAATGCAGA ACCGGCGGCA AGACGCTATT CCCTGGAGTG GAGTACCCGC 
CTCAATGAGG CCTTAGCCAT ATTGCGGGAC CCCCTGCGGC GTGCCGATTA TCTCCTGCAG 
CGGCAAGGCG TGGACGCGCT GGGTGAGCAG GTGAAGGTCG CTGACCCGGA ACTGCTGATG 
ACCCAGATGA TCTATCGCGA ACGTCTGGAA GATCTGGTGG CGGCACACGA CCTGTCGGGC 
ATGGAGGCTT TGCGTCAGGA AGTGGATACG GCAGTGAGCG GCGTGGTGCA ACGTCTCAGG 
GGATTGTTGG GCATTTTACC CTGTGTTGAG CCGGAAGCAG CGGGTGCTGC GCTGCGCGAG 
TTGCAGTTTC TCGATAAGCT TCTCGGCGAG ATCGATCGCT GCGAAGAGTC TTTGCAGAAT 
GCCTGA 

 

Protein sequence

MQPFRADLSL YAVAGLPETY DLDVQALRTQ VLALQKGLHP DRFANAEPAA RRYSLEWSTR 
LNEALAILRD PLRRADYLLQ RQGVDALGEQ VKVADPELLM TQMIYRERLE DLVAAHDLSG 
MEALRQEVDT AVSGVVQRLR GLLGILPCVE PEAAGAALRE LQFLDKLLGE IDRCEESLQN 
A