Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0670 |
Symbol | |
ID | 7135986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 599805 |
End bp | 600575 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643529076 |
Product | RNA methyltransferase, TrmH family, group 1 |
Protein accession | YP_002425158 |
Protein GI | 218666933 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.373785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGGA CGTCTTTGCA GGGCTTGCGT ATTGTCCTTG TTGAACCCAG TCACCCCGGC AATATCGGGG CGGCGGCACG GGCCATGAAG GTGATGGGGT TGCGCCATCT GGTGCTGGTC AGTCCGCGCT TTTTCCCCGA CCCGGAGGCC ACGGCTCTCG CCTCCGGTGC CGAAGATATT CTGGAATCGG CGCAGGTCTG TACCAATCTG GATACGGCCC TGCAGGGTTG CCACAAGGTC TATGGCACCA GCGCCCGCGG TCGTCGTATC CAGTGGCCCG CCAGCAATGC GCGGGAGGCG GCGGGGGAGA TCCTCGCGGA TCTGGACACG GGAGATTGTG CCCTGCTCTT CGGCCGGGAG CGGACGGGGC TGACCAATGC GGAGATGGAT CGTTGTCAGG TGCTGGTGCA TATCCCTACG GCGGATGAAT ACCACTCCCT GAATCTGGGG CAGGCGGTGC AGGTGCTTGC CTATGAGCTC CACATGGCCG CCCTGACGGC CCAGCCAGCG CAGGATGTGC CCGCAGAGGA TGTGCCGGAG CAACCCGCCC CCATCGAGGA TATGGAAGGC TTTTATGGGC ACTTGCAGCA TGTGCTGCGC CGCAGTGGTT TTCTGCAGGA GATTCGCGCT ACGCGCATGA TGCGTCGCTT GCGCCGTCTT TTCGACCGCG CCAGGCCGAG CCAGAACGAG GTGAACATCC TGCGCGGTAT CCTTACCGAA ATCGAGCGCT GGGCGTCTAA AGTAGACAGA AAGGATCAGG ATAGTCTTTA A
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Protein sequence | MIGTSLQGLR IVLVEPSHPG NIGAAARAMK VMGLRHLVLV SPRFFPDPEA TALASGAEDI LESAQVCTNL DTALQGCHKV YGTSARGRRI QWPASNAREA AGEILADLDT GDCALLFGRE RTGLTNAEMD RCQVLVHIPT ADEYHSLNLG QAVQVLAYEL HMAALTAQPA QDVPAEDVPE QPAPIEDMEG FYGHLQHVLR RSGFLQEIRA TRMMRRLRRL FDRARPSQNE VNILRGILTE IERWASKVDR KDQDSL
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