Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0649 |
Symbol | |
ID | 7134868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 581353 |
End bp | 582105 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643529056 |
Product | endonuclease/exonuclease/phosphatase family protein |
Protein accession | YP_002425139 |
Protein GI | 218667695 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.441021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGTCCT TCAACATCCA GGTGGGCATC GGCTCCCACC GCGCCCGGCA CATGTTCCTG CACGGCTGGA AGTACGTGAT GCCCCATGGT CAGAGTCTGC GCAACCTGGA GCGGATCGCC GCGGTCTTGG AGGGAACCGA CGTCGCCGGA CTCAACGAAG TCGATGCCGG CTCTTTTCGC AGCCAGTATG TCAACCAGGC GGGTTTTCTC GCTGACCGCG CCCATTTCCC TTACTGGGCG CAACAACGTA CCCGTGACTT CGGCGACTTT GCCCAGCACA GCAATGGCAT TCTCTCCCGC TGGCCCATTG AAGAGACCAT AGCGCATTCC CTGCCCAGCT TCATGAATGG GCGCGGCATG CTGGAAAACC GGCTCAACGC TGGTGGAAGA TCCCTGACAG TGATCATCAC CCACCTCGGC CTTAGCCGTC ATGCGCGCCT CAGTCAGATA CGCGATCTCG CCCAACGCCT GCGCGGACGC CCGAATCTCA TTCTCATGGG CGACCTGAAC TGCACGGCGC GCTCCCCGGA AATGCGCCTG CTCCTCAATG AAAGTGGCCT GCAGGCGCCG CCCTGGAGCC CACCGACCTT TCCCAGCTGG TCACCGCGCT TTTCCTTCGA TCACATCCTC TGTAGCCCTG ACCTGGAATT CACGATGATT GAAACCGTCA CCGAGCCCCT CTCCGATCAC CTCGCCCTCA AGGCAAAACT GCGCTGGGAC TCGGCGACAG CGGCAGATGC AAAGCACCAG TGA
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Protein sequence | MTSFNIQVGI GSHRARHMFL HGWKYVMPHG QSLRNLERIA AVLEGTDVAG LNEVDAGSFR SQYVNQAGFL ADRAHFPYWA QQRTRDFGDF AQHSNGILSR WPIEETIAHS LPSFMNGRGM LENRLNAGGR SLTVIITHLG LSRHARLSQI RDLAQRLRGR PNLILMGDLN CTARSPEMRL LLNESGLQAP PWSPPTFPSW SPRFSFDHIL CSPDLEFTMI ETVTEPLSDH LALKAKLRWD SATAADAKHQ
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