Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0648 |
Symbol | |
ID | 7137019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 579724 |
End bp | 580860 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643529054 |
Product | ABC transporter, permease protein, putative |
Protein accession | YP_002425137 |
Protein GI | 218665617 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGA AAAGCCCAGA CCCGCACACC GCCAAAAACA GTGCGCACCA ACCGCGATGG GAGTGCGATG ATGGAACGCT GCGCCTCAGC GGACGCTGGA CATTGCGGCG TCTCGGCGGG AGATTCGCGG CACAGGAAGC GGCACTGCGG AACATCAGCC CGGAAGTATG CTGGGATCTC TCGGCAGTCG AGGTCCTCGA CAGCGCCGGG GCCCTCCTGC TTTGGCGCGC ATGGGGCAAT CACCTACCCA ACAATATCCG GATGGCCGAC CAGCATCACA GCATCTTCGC CCGTCTGGCG GATATCCAAC CCGTCGCGGC GCGCCCCCGG CATCCCTGGC ATTTTCTCGA CCAGCTCGGC GCCTTCCTGA TAGAAACCGG ACGGGACCTA TGGGGACTTT TTCTGCTCAT GGGTGCTCTG CTGCTGGAGT TCGGGCGTGG CCTCCGCCAC CCGCGAAGCT TTCCCTGGCG CGAAATCTCC GCCACCATCG TCAATACCGG ACCGAATTCA TTGCCCATCC TCACCCTGAT CGGCTTCCTC ATCGGCGTGG TGATTTCCTT TCAGTCGGCC TCGACGCTCG CCCAATACGG CGCCAACATT TACATCATCA ACATTGCGGG TCTGAGCATA CTGCGTGAGT TTGGCCCGCT GATCACCGCC ATCATTCTCT CGGGGCGTTC CGGCTCGGCG TTTACCGCGC AAATCGGCGG CATGTGCGTA ACCGAAGAAC TGGATGCCCT GCGCACTTTC GGCATTCCCC CGATCCGCCG TCTGATTCTG CCCAAGGTCA TTGGGCTGGC GCTGGTGATG CCACTGCTCG TCCTCTGGAC CGATATGGTC GGACTGTACG GAGCCATGCT CGTGGCCAAA CTGGAGCTCG GCATCAGCAA CCGCTTCTTT ATCCAACAAA TGCCCGTGGT AGTCCCCAGT TTCAATTTGT GGCTGGGCGT TGTCAAAGGA GCCCTCTTCG GTATCCTCAT TGCGTGGATC GCTGGCTTTC ATGGCCTCAA GGTGAAGCCC AACACCACCA GCCTGAGCAG GGAAACCACC AACTCGGTAG TCATGTCCAT CACCGTGATG ATTCTTATCG ATGCCATTCT TGCCCTGGTC TTTGCCAATA CGGGAATCTC CAACTGA
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Protein sequence | MTEKSPDPHT AKNSAHQPRW ECDDGTLRLS GRWTLRRLGG RFAAQEAALR NISPEVCWDL SAVEVLDSAG ALLLWRAWGN HLPNNIRMAD QHHSIFARLA DIQPVAARPR HPWHFLDQLG AFLIETGRDL WGLFLLMGAL LLEFGRGLRH PRSFPWREIS ATIVNTGPNS LPILTLIGFL IGVVISFQSA STLAQYGANI YIINIAGLSI LREFGPLITA IILSGRSGSA FTAQIGGMCV TEELDALRTF GIPPIRRLIL PKVIGLALVM PLLVLWTDMV GLYGAMLVAK LELGISNRFF IQQMPVVVPS FNLWLGVVKG ALFGILIAWI AGFHGLKVKP NTTSLSRETT NSVVMSITVM ILIDAILALV FANTGISN
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