| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0645 |
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| Symbol | mpl |
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| ID | 7135887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 576924 |
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| End bp | 578291 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643529051 |
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| Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
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| Protein accession | YP_002425134 |
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| Protein GI | 218668082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.881098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATCC ACGTCCTCGG CGTCTGCGGG ACTTTCATGG GAGGCATCGC GCTGCTGGCG
CGGGCGGCGG GGCATCAGGT AACGGGTTCG GATGCACACA CCTATCCTCC CATGAGTGAT
CTGCTGGCCC GCGAAGGGGT TACGGTCCAT GAAGGCTATG ATCCCGCTCA ACTGAATCCT
GTCCCCGACC TGGTACTCAT CGGTAACGCC CTGTCGCGGG GCAACCCCTG TGTGGAGGCG
GTTCTGGACC GGCAGATGCC CTATGATTCC GGTCCCGCCT GGCTGTCCCG GGAGATACTG
CAAAGCCGCT GGGTATTGGC CGTGGCGGGT ACCCACGGCA AGACCACGAC GACCTCCATC
CTGACCTGGA TATTGCAGGA GGCAGGACTC GATCCAGGGT TTCTCATCGG TGGGGAGGCG
CGCAATTTCG GTGTATCGGC GCGGCTGACG GACAGCCCTT TTTTTGTGAT CGAGGCGGAT
GAGTATGACA CCGCCTTTTT CGATAAACGT TCCAAGTTCG TGCACTATCA CCCGCGGTCG
CTGATACTCA ACAATCTGGA ATACGATCAT GCCGATATAT TTCCGGATAT GGAGGCGATC
ATCACCCAGT TTCACCACCT GCTGCGCACC GTACCCGGCG CGGGCGCGAT TATCGTGAAG
GATGGAGTGC CAGCGCTGAA ACGGGTGCTG GAGCGCGGTT GTTGGACACC CCTGCAACGC
TTTGCCGGTA CGGGCGAGTG GCAGGTGCGG CTGGACGCTG TGGATGGCAG CCGTTTTACC
GTGCTGGAGC AGGGCGTCGA GCGCGGGCAA GTCGGTTGGG AGATGGCCGG GTCGTTCAAT
GCCGAGAATG CATTGGCGGC CTTGCTGGCG GCGCGGCATG CCGGGGTGCC GCTGGCGGTC
GGATGTGCAG CATTGCGCAG CTTTCAGGGG GTGCGGCGGC GCCTGGAGCT GCGCGGACGG
GCTGGCGGCG TGGCGGTGTA TGACGACTTT GCTCACCACC CCACGGCCAT CGCCGCCACC
ATCACGGCCC TGCGCGGGCG GATGGAGGGG ACGGAGCGTC TGATTGCCGT GCTGGAACCA
CGCTCCAACA CCATGAAGAT GGGGGTGCAC CGGCAGACGC TGGGACCAAG TTTGCAAGGC
GCGGATCGAG CGTTTGTCTA TGCTCCGGCA GATCTGGGTT GGGATGTGGC GGCCGCCCTG
GATTCCGCTG CGCAAGTTTA TGTCGATATG GACGCGCTCT TGCGGGCGCT GGACGCAGAA
TTGCGCCCGG GGGATGATGT GCTCATCATG AGCAACGGTG CCTTCGGCGG GATTCACGGA
CGCCTGCTCG AACGTCTCGC CCGACGGGAT GTACCGGCAG GGTCGTAA
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| Protein sequence | MHIHVLGVCG TFMGGIALLA RAAGHQVTGS DAHTYPPMSD LLAREGVTVH EGYDPAQLNP
VPDLVLIGNA LSRGNPCVEA VLDRQMPYDS GPAWLSREIL QSRWVLAVAG THGKTTTTSI
LTWILQEAGL DPGFLIGGEA RNFGVSARLT DSPFFVIEAD EYDTAFFDKR SKFVHYHPRS
LILNNLEYDH ADIFPDMEAI ITQFHHLLRT VPGAGAIIVK DGVPALKRVL ERGCWTPLQR
FAGTGEWQVR LDAVDGSRFT VLEQGVERGQ VGWEMAGSFN AENALAALLA ARHAGVPLAV
GCAALRSFQG VRRRLELRGR AGGVAVYDDF AHHPTAIAAT ITALRGRMEG TERLIAVLEP
RSNTMKMGVH RQTLGPSLQG ADRAFVYAPA DLGWDVAAAL DSAAQVYVDM DALLRALDAE
LRPGDDVLIM SNGAFGGIHG RLLERLARRD VPAGS
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