Gene AFE_0629 details

Gene Information

• Locus tag: AFE_0629
• Symbol: rpiA
• ID: 7135470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 560051
• End bp: 560710
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643529035
• Product: ribose 5-phosphate isomerase A
• Protein accession: YP_002425118
• Protein GI: 218667168
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0120] Ribose 5-phosphate isomerase
• TIGRFAM ID: [TIGR00021] ribose 5-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACTG ACGCACTCAA AAAAATGGCG GCCGAAGCCG CTCTGCGCTA TATCCAGCCC 
GGCATGGTCG TCGGGGTGGG CACTGGCTCC ACCACCAACT TCTTCATCGA AGCATTGGGC 
GCTGCCAAGA TTCATGTGGA CGGCTACGTC GCGTCCAGCA TCGCTACCGA AAACCGCCTC 
AAGGCACAGG GCCTCAATGT GCTCGAACTG AATGCCACGG GCGATATTCC GGTCTATATT 
GACGGCGCTG ACGAGGCCGA CCCGCATTTC CGCCTCATCA AGGGCGGCGG CGGTGCCCTT 
ACCCGCGAAA AGATCGTCGC CAGTGCCGCC CGACTGTTCG TGTGTATTGC GGATGACAGC 
AAGGATAGAC CCATGCTCGG CAAATTCCCC CTCCCTGTGG AAGTGATTCC TTTTGCCCGC 
AGCTTTGTCG CCCGGCAACT GGTGAAGATC GGTGGCAGCC CCACCCTGCG CAGCGGTATC 
ACCACGGACA ACGGCAATGT CATCCTCGAC GTCACCGGAC TCGATTTCTC CGATCCGTTG 
CGGATGGAAG AAACCATCAA TGCGATCCCG GGGGTGCTGG ATAATGGCAT CTTTGCCCAT 
CGGCGTGCGG ATGTGATGCT GTTTGGCAGC GCGGGCGGCG TCATCGAACG CAAGGCATAA 

 

Protein sequence

MNTDALKKMA AEAALRYIQP GMVVGVGTGS TTNFFIEALG AAKIHVDGYV ASSIATENRL 
KAQGLNVLEL NATGDIPVYI DGADEADPHF RLIKGGGGAL TREKIVASAA RLFVCIADDS 
KDRPMLGKFP LPVEVIPFAR SFVARQLVKI GGSPTLRSGI TTDNGNVILD VTGLDFSDPL 
RMEETINAIP GVLDNGIFAH RRADVMLFGS AGGVIERKA