Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0624 |
Symbol | leuC |
ID | 7136649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 556828 |
End bp | 558240 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643529030 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_002425113 |
Protein GI | 218666384 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTGCAA AAACGCTCTA CGATAAATTA TGGGAAAGCC ATGTGGTCCA TACGGAGCAG GACGGCGGAG TGTTGCTCTA TATCGACCGT CAATTGTTGC ACGAAGTGAC CAGCCCGCAG GCCTTTTCCG GGCTGCGGGC GGCGGGCCGC AAGGCGTGGC GCATTGATGC CAATATCGCA ACGGCCGACC ACAACGTGCC GACCACTGAT CGCGCCGCAG GGATTGCCGA CGCCACCTCG CGCTTGCAGG TGGATACCCT CGACCGGAAC TGTGCGGAGT TTGGCATCGA AGAATTTGGT ATGCACGATA AGCGTCAGGG CATTGTTCAC GTCATTGCAC CGGAACAGGG CCTGACCCTG CCGGGCATGA CGGTGGTCTG TGGCGACTCC CACACGGCGA CCCATGGGGC GTTGGGGGCG CTGGCCTTCG GGATCGGCAC CACCGAAGTG GAGCACGTGC TGGCGACCCA GTGCCTGTGG GCGCGCAAAT CCAGATCCAT GCGCATCTGG GTGGAGGGTG AGCTGGGCAA TGGGGTGACC GCGAAAGATC TGGTGCTGGC CATCATCGGG CGAATCGGCA CGGCGGGTGG CACTGGCTAC GCCATCGAGT TTGCCGGACC TGCGGTGCAT GCGCTGTCGG TTGAAGGCCG TATGACCCTG TGCAATATGG CCATTGAAGC GGGTGCGCGC TCGGGCATGG TGGGTGTGGA TGCCGTCACC ATCGATTATC TCCGTGGCCG CCCCTATGCC CCGGTCGGCA AGATCTGGGA TCAGGCGGTT GCGGTCTGGG GCGAACTCCA CAGCGACCCT GATGCGCAGT TTGACGCAGA GATTCGTCTG GAGGCCACGG ATGTGGCCCC CCAGGTCACC TGGGGCACCA GCCCGGAGAT GGTGGTGGAT ATTTCTGCGC GGGTCCCCGA TCCTGCACTG GAAAAGGACC CGGTGCGGCG CAAGGGCTGG AGTGATGCAC TGGCTTACAT GGATCTGGCG GCCGCAACAC CCATTTCTTC GATAGCGCTG GACAAGGTAT TCATCGGCTC CTGCACCAAT GCCCGCATTG AAGACTTGCG GGCGGCGGCG GCGGTTGCCA GAGGCCATCA CAAGGCTGCG TCGGTCAAGG CGGTGCTGGT AGTGCCGGGC TCCGGTCTGG TCAAGGCGCA GGCGGAAGCC GAAGGCCTGG ACCGCATCTT CCGGGATGCC GGTTTTGAAT GGCGGGAGCC AGGCTGCTCC ATGTGTCTGG CCATGAACGC CGACCGCCTG GAGCCGGGGG AGCGTTGCGC GAGCACCAGT AATCGCAATT TTGAAGGGCG TCAGGGCGCT GGAGGACGGA CCCACCTGGT GAGCCCCGCC ATGGCCGCAG CGGCTGCCAT TGCCGGCCAT TTTGTGGATG TGCGTGACTG GATCATGCAC TAA
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Protein sequence | MSAKTLYDKL WESHVVHTEQ DGGVLLYIDR QLLHEVTSPQ AFSGLRAAGR KAWRIDANIA TADHNVPTTD RAAGIADATS RLQVDTLDRN CAEFGIEEFG MHDKRQGIVH VIAPEQGLTL PGMTVVCGDS HTATHGALGA LAFGIGTTEV EHVLATQCLW ARKSRSMRIW VEGELGNGVT AKDLVLAIIG RIGTAGGTGY AIEFAGPAVH ALSVEGRMTL CNMAIEAGAR SGMVGVDAVT IDYLRGRPYA PVGKIWDQAV AVWGELHSDP DAQFDAEIRL EATDVAPQVT WGTSPEMVVD ISARVPDPAL EKDPVRRKGW SDALAYMDLA AATPISSIAL DKVFIGSCTN ARIEDLRAAA AVARGHHKAA SVKAVLVVPG SGLVKAQAEA EGLDRIFRDA GFEWREPGCS MCLAMNADRL EPGERCASTS NRNFEGRQGA GGRTHLVSPA MAAAAAIAGH FVDVRDWIMH
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