| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0623 |
|---|
| Symbol | |
|---|
| ID | 7134283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 556014 |
|---|
| End bp | 556778 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643529029 |
|---|
| Product | methyltransferase, UbiE/COQ5 family |
|---|
| Protein accession | YP_002425112 |
|---|
| Protein GI | 218667049 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAAC AAAAATTGGT AGATGCACAG TTTGGTGTCG CCGCAATGGA TTACCTGCAG
AGCCCCACCC ATGCGCAGGG GGCTGATCTG CAGCGGTTGC GTGCGTTGGC TGATGGTCAG
CGCGATTGGC GGGTGCTGGA CCTCGGTTGC GGTGCCGGAC ACGCGAGCTA TGCGCTGGCT
GGCGAAGTCA TGGAGGTAAC GGCTTATGAT CTCTCGGCTG AGATGCTGCT GGTGGTGGCG
GCCGAGGCGC AGCGGCGCAA GCTGGCGAAT GTGCGGACGC AGCAAGGCGT GGCGGAAATT
TTGCCTTTCG CCGATGCCTG CTTTGATCTG GTGGTGACCC GCTTCTCGGC GCACCACTGG
GCGGATGTGC CGCGTGCCCT GAAGGAAGTG CGGCGGGTGC TCCAACCGGA GGGCAGACTG
GTGGTGATCG ATGTTATCGC ACCGGAAACG CCGCTGCTGG ATACCCTGCT GCAAAGCGTC
GAAGTCTTGC GGGATGCCTC CCATGTGCGC GATTATCGAC GCTCTGAGTG GGAAGACATG
CTGGTCCGGG CGGGTTTCGT TGTCAGCGAC CATCAGGCCT GGAAATTGCC TTTGCGCTTT
GAGAGTTGGA TTGCGCGCAT GCGGACCCCG GAGCTGCGGG TCACCGCGAT CCGCAGTCTG
TGCGCGCATG CCGCCACCGA GGTGCGGGAC TATTTCGCCA TTCAGCCGAA CAACGACTGT
GCCATAGATG CGGCCTGGAT AGAGGCGGTA TCCCCGTCCG CCTGA
|
|---|
| Protein sequence | MDQQKLVDAQ FGVAAMDYLQ SPTHAQGADL QRLRALADGQ RDWRVLDLGC GAGHASYALA
GEVMEVTAYD LSAEMLLVVA AEAQRRKLAN VRTQQGVAEI LPFADACFDL VVTRFSAHHW
ADVPRALKEV RRVLQPEGRL VVIDVIAPET PLLDTLLQSV EVLRDASHVR DYRRSEWEDM
LVRAGFVVSD HQAWKLPLRF ESWIARMRTP ELRVTAIRSL CAHAATEVRD YFAIQPNNDC
AIDAAWIEAV SPSA
|
|---|
| |