Gene AFE_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0615 
Symbol 
ID7134517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp546946 
End bp548208 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content62% 
IMG OID643529021 
Productglycosyl transferase, group 1 
Protein accessionYP_002425104 
Protein GI218666145 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0722468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGA CAACCCCGAC GGTAGGCTAC GTACTGAAGC GTTATCCGCG CCTTTCGGAA 
ACTTTCATTC TCAACGAAAT GCGCGCACTG GAGCGTCTGG GTACCCCCCT GCACATCTTT
TCGCTTCTGC GGCCCGAGGA CGCCCCGCGG CATCCCACGG TTTCGGAGGT CCGGGCGACC
GTGACGTATC TTCCCCTTAC TTGGCCCCGG ATCATATTTG CGGTTGCCAG GGGCCATGCC
GTCGTGGCGG CCCGGGCACC GCTGCGCTAC CTGCATGCCA CCGGGCTCGC ATTGTGGTGG
TCCATCCGCA CCCGTCGGCC ACTGAGCGTC GGGAAACAGT TCCTGCGTTC CGGTTATGTA
GCGCATGGTT GTCTGCAAAA CAACATTCAA CACCTCCATG CCCACTTCGC CAATGCACCC
GCCACGGTCG CTCGCCTGGC CGGGGTCATG TGCAATATTC CCTACAGCTT CACAACGCAC
GCCAAGGATC TCTACCTGAC CCCCCAGGAG GCCATGCGCC GACGGATCAA GTCGGCGCAT
TTCGTTCTCA CCTGCACCCG CTACAATGTC GAATACCTGC GCGGTTTTCT GCCGCGCCAG
GACTGGGACA AAATCCATCT CGTCTACCAC GGTATCGATC TTGCGGCCTT TCCTCAGGGT
GAGTCTTTTG CGGATTTTCC GCTGGGGGAA AATGCCGATC TGCCCTTGAT CCTTTCAGTG
GGTCGCCTCG TCCCCAAAAA AGGGATGCGG GACTTGGTTA CCGCTTGCCA CCTGCTGCAC
AGCCGAGGGA TTGCCTTTCG TTGTGTCATC ATCGGTGAAG GCCCGTTGCG CCAGGAACTG
GAGAGCCACG TCGCCGAGCT GGGCCTGACG GCTATGGTAA CCCTGCCGGG TGCCATGGCT
CACGACCGCC TCCTGGCATT TTACGGACAA GCAACCGTTT TCGCTCTCGC CCCCCATGTA
ACGGAAGACG GAGACCGGGA CGGCATCCCC AACGTTCTTG CGGAAGCCAT GGCGGCTGGC
ACGCCCGTGG TCTCAACCGC GGTTTCGGGT ATCCCCGAAT TGATCGAAGA CGGCCGTACC
GGGCTGCTGG TGCCGCCGCG GGACCCGGTG GTGTTGGCCG ACACCTTGGA ACGGGTGCTT
GTCGACGCGC CGCTACGGCG CCGCCTCGCG GCGGCGAGCC GGGGCAAGAT AGAGGAGCGC
TTCGAATGCT GGGAGACCGC CAAGGCCCTG CGCGCCCTAT TCGTGCAGAG TGTGCAGCCA
TGA
 
Protein sequence
MTATTPTVGY VLKRYPRLSE TFILNEMRAL ERLGTPLHIF SLLRPEDAPR HPTVSEVRAT 
VTYLPLTWPR IIFAVARGHA VVAARAPLRY LHATGLALWW SIRTRRPLSV GKQFLRSGYV
AHGCLQNNIQ HLHAHFANAP ATVARLAGVM CNIPYSFTTH AKDLYLTPQE AMRRRIKSAH
FVLTCTRYNV EYLRGFLPRQ DWDKIHLVYH GIDLAAFPQG ESFADFPLGE NADLPLILSV
GRLVPKKGMR DLVTACHLLH SRGIAFRCVI IGEGPLRQEL ESHVAELGLT AMVTLPGAMA
HDRLLAFYGQ ATVFALAPHV TEDGDRDGIP NVLAEAMAAG TPVVSTAVSG IPELIEDGRT
GLLVPPRDPV VLADTLERVL VDAPLRRRLA AASRGKIEER FECWETAKAL RALFVQSVQP