Gene AFE_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0609 
Symbol 
ID7134313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp541415 
End bp542428 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID643529015 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_002425098 
Protein GI218666879 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGC GGATTCTCGT CACCGGTGCC GCCGGCTTCA TCGGCTACCA CCTGTGCCGC 
CGTCTATTGA CCGAAGGGTG GATCGTGCAT GGTCTTGATA ACCTCAACGC CTATTATGAC
CCCGCCCTCA AGCGGGATCG CCTGGCGCAT CTGGAAAACC ATCCGGACTT TCAATTCCAC
ACCGTGGATC TTGCCGATCG GGAGGCCATG ACAGGCCTCT TCGCCGGGCC ACATTTTGAT
GTGGTGGTGA ATCTTGCGGC CCAGGCGGGC GTCCGCCATT CCCTCCAGGA TCCCGCCGCT
TATGTCGACA GCAATCTGGT CGGTTTCGCC AATGTTCTGG AGGGCTGTCG CGCCCAGGCC
GTGGACCATC TGCTTTTCGC CTCCTCCAGT TCGGTCTATG GCGCCAACGC CCGCCTGCCT
TACAGCGTCC ATGACGGGGT CGATCATCCG CTCAGCCTCT ACGCCGCCAG CAAGCGGGCC
GGCGAACTCA TGGCCCATAG CTATGCACAT CTCTTCGGCA TTCCCTGCAC CGGTTTGCGT
TTTTTCACGG TCTACGGACC GTGGGGCCGA CCGGACATGG CCTATTTTCG TTTCACGCGC
CAGATCCTTG CCGGAGAGCC TATCCCCGTC TTCAATCATG GTCAGATGCG CCGGGATTTT
ACCTATATCG ACGACGTCAT CGAAGGCGTG GTACGGCTCC TGGACTTCGC ACCGCGCCCT
GCTCCGATGT CGACGGAGCG GCCGGATCCG AGCACCAGCG ATGCCCCCTT CCGTCTTTAC
AATATTGGCA ACCATACCCC TGTAGCCCTG CTGGATTTCA TCGCGATCCT GGAGGATCTG
CTGGCGCGCA AGGCCGACAT CGAATGGCTG CCCATGCAGG CCGGGGACGT TATTGCCACC
TATGCCGATG TGGGTGAATT GCAGGAGGCG GTGGGTTTTT CCCCCGCCAC CCCCTTGCGT
GATGGTCTTG CCCGTTTCAT CGACTGGTAT CGGAGTTATT ACGACGCATC TTGA
 
Protein sequence
MSRRILVTGA AGFIGYHLCR RLLTEGWIVH GLDNLNAYYD PALKRDRLAH LENHPDFQFH 
TVDLADREAM TGLFAGPHFD VVVNLAAQAG VRHSLQDPAA YVDSNLVGFA NVLEGCRAQA
VDHLLFASSS SVYGANARLP YSVHDGVDHP LSLYAASKRA GELMAHSYAH LFGIPCTGLR
FFTVYGPWGR PDMAYFRFTR QILAGEPIPV FNHGQMRRDF TYIDDVIEGV VRLLDFAPRP
APMSTERPDP STSDAPFRLY NIGNHTPVAL LDFIAILEDL LARKADIEWL PMQAGDVIAT
YADVGELQEA VGFSPATPLR DGLARFIDWY RSYYDAS