Gene AFE_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0602 
Symbol 
ID7134401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp535621 
End bp536505 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content62% 
IMG OID643529008 
Productcation ABC transporter, periplasmic cation-binding protein, putative 
Protein accessionYP_002425091 
Protein GI218666083 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGACGC TGATCGCCCT GTGCGCGGGG CTGGGCACGG CGCAGGTGGC TGCCGCAGCG 
ACCATTCATG CGGTCGGGAT AGAAAATCAA TATGCCAACG TGATCAGTCA GATCGGCGGT
GAATATGTGT CGGTCACTGC GATCCAGAGC AACCCCGGCA CAGATCCGCA CGCCTTTGAA
GCCAGTCCTG CGGTGGCCCG GGAGCTTGCC GCGGCGCAGC TCGTGGTGCG GAATGGGGTC
GGCTATGACG GTTGGGTCCG GAAAATTTTG CGGGCAAACC GGAACGCGCA GCGCAGGGTG
ATCGTCGTCC AGGATCTGCT TCATCTGCCG GAAAACACCC CCAACCCCCA TCTCTGGTAC
AAGCCGGAGA CCATGCCTGC GGTGGCGCAG GCAGTTGCGG CGAGCCTGAC CGAACTGGAT
CCGGCCCATG CCGCCACCTT CGCGGCCAAT GTGCGCAGGT TCGATGCCTC TCTGAAACCG
TGGTACCACG CCATCGCCCG CTTCAAGGCC CGCTTTGGCG GCACGCCGGT GGCAGTGACG
GAGCCCGTCG CCGATTATTT GCTGGAAGCC GCGGGTTGCG ACATCAAAAC GCCGTGGAAA
CTCCAGGCCG CCATCATGAA TGGTACGGAC CCGGCACCGC AGGATGTGAG CGCCCAGAAC
CAGCTCCTGC AGCGGCATCA GGTCAGAGTC TTTGTGTATA ATCAGCAGGT GACAAATTCA
TTGACGGCTT CTTTCCTGAG TCGGGCGCAG GCGGCGAAGA TCCCCGTGGT CGGTGTCTAT
GAAACCATGC CGGCGGGTTA CCACTATCAG TCTTGGATGC TGGCGGAGGT AAATGCGCTG
CGTAACGCGG TGGAGCATGG CACTTCGACG ACCGTGCTGA AGTAA
 
Protein sequence
MLTLIALCAG LGTAQVAAAA TIHAVGIENQ YANVISQIGG EYVSVTAIQS NPGTDPHAFE 
ASPAVARELA AAQLVVRNGV GYDGWVRKIL RANRNAQRRV IVVQDLLHLP ENTPNPHLWY
KPETMPAVAQ AVAASLTELD PAHAATFAAN VRRFDASLKP WYHAIARFKA RFGGTPVAVT
EPVADYLLEA AGCDIKTPWK LQAAIMNGTD PAPQDVSAQN QLLQRHQVRV FVYNQQVTNS
LTASFLSRAQ AAKIPVVGVY ETMPAGYHYQ SWMLAEVNAL RNAVEHGTST TVLK