| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0600 |
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| Symbol | pmbA |
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| ID | 7136749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 533981 |
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| End bp | 535327 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643529007 |
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| Product | pmbA protein |
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| Protein accession | YP_002425090 |
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| Protein GI | 218666455 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAG CCCCCCATTC TACGCTGGAT ACCAGCGTCC TGACCCAAAT CGTTGATGAC
ATGCTCCACC TCGCCCGCGA GCAGGGTGCC AGTGCGGCGG AGGCTTCCGC CAGCACCGGC
AAAGGCTTGT CGGTAACCGT GCGCCTCGGA GAAGTGGAAT CCATCGAATA CCACCAGGAC
AAGGGGCTGG GGGTCACGGT CTATCTCGGT CAGTCCAAAG GCAGCGCCTC CACCTCGGAC
TTTTCCCGCA AGGCCTTGTC AGAAACCGTT TCAGCGGCGC TCACCATTGC CCGGCATACG
GCGGCAGACC CGTTTGCCGG GCTTGCCGAT CCCGAACTTT TCGCCAAAAC CTTCCCGGAT
CTGGACCTCT ATCATCCCTG GTCCATAGAT GCAGACAGCG CCGCCGATCT GGCGCGTCGT
TGCGAGGCGG CCGCCCGTGA GAGCGATCCG CGCATTCACA ACTCCGAAGG CGGCAGCCTC
GGCACCGGCG AGGGCTCGTC GGTCTATGGC AATAGCCTGG GTTTCATGGG CAGCAGCCGA
TCATCGCGAC ACAGCCTGTC CTGCTCGGTG ATTGCGGAAG ACCGTAACGG CGGAATGCAA
CGGGACTACT GGTATGACGT GGCCCGTGCC GCCGATGCGC TGGCGACGCC GGAAACCATC
GGCAGGACCG CCGCGCAGCG CGCTCTGCGC CGCCTGGACG CCCGCAAGGT AGCCACCACC
AAGGCCCCGG TGCTCTTTGA AAACCAAGTC GCGTCCAGCC TTATCGGCCA TCTCGCCAGC
GCCATCAGCG GCAGCAGCCT GTATCGCAAA AGTTCCTTTC TGGTGGACAG CCTTGGCAAA
CAACTCTTCC CGGAACACGT CCGCGTTTAT GAAGAACCCT TACGGCGTCG TGGGTTGGGT
AGCTGCAGTT TCGACGGCGA AGGGGTCGCC ACCCGCAACC GCGACATCGT CTCCGGGGGC
GTACTGGAAG GCTACATCCT CGACAGTTAC AGTGCCCGCA AATTAAACAT GAAGACCACG
GGCAATGCGG GCGGCGCCCA CAACCTCACC TTGCAGCCGG GCAAGGCATC TCTCGATGAA
CTGCTCCACC AGATGGGGCA CGGCCTGCTG GTTACCGAGC TCATCGGCTT CGGCATCAAC
ATGGTGACCG GTGATTACTC CCGAGGCGCT GCCGGCTTCT GGGTGGAGCA TGGGGAGATC
CAGTATCCCG TCGAAGAGAT CACCATCGCC GGGACCTTGC AGGGCATGTT CCAGGGCATG
CGCGCCGTAG GCAATGACCT GCTCATTCAC GGCAACACCG GCTGCCCCTC CATCCTCATT
GACGAGATGA TGATTGCCGG CGACTGA
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| Protein sequence | MSQAPHSTLD TSVLTQIVDD MLHLAREQGA SAAEASASTG KGLSVTVRLG EVESIEYHQD
KGLGVTVYLG QSKGSASTSD FSRKALSETV SAALTIARHT AADPFAGLAD PELFAKTFPD
LDLYHPWSID ADSAADLARR CEAAARESDP RIHNSEGGSL GTGEGSSVYG NSLGFMGSSR
SSRHSLSCSV IAEDRNGGMQ RDYWYDVARA ADALATPETI GRTAAQRALR RLDARKVATT
KAPVLFENQV ASSLIGHLAS AISGSSLYRK SSFLVDSLGK QLFPEHVRVY EEPLRRRGLG
SCSFDGEGVA TRNRDIVSGG VLEGYILDSY SARKLNMKTT GNAGGAHNLT LQPGKASLDE
LLHQMGHGLL VTELIGFGIN MVTGDYSRGA AGFWVEHGEI QYPVEEITIA GTLQGMFQGM
RAVGNDLLIH GNTGCPSILI DEMMIAGD
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