| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0570 |
|---|
| Symbol | hemG |
|---|
| ID | 7134886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 507844 |
|---|
| End bp | 509184 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643528977 |
|---|
| Product | protoporphyrinogen oxidase |
|---|
| Protein accession | YP_002425062 |
|---|
| Protein GI | 218666045 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAG TCATCATCAT TGGCGGGGGT ATTTCAGGTC TGGCGACGGC ATATTTCCTG
CGTAAACGAG GTTGGTCTCC CTTGCTGCTG GAGGCCGGTG CCGCCCCCGG CGGCAACCTG
CAGAGCAGAC AGGAAGAAGG CTACCTGCGG GATATGGGAC CAAACTCGCT GATGCTCAAA
GGCCGGATCG TCCCGGAATG GCTCCGCGAA CTGCAATTGG AAGGAGACAT CGTCGAGGCC
AACCCGCTCG CCGGGCGCCG CTATGTCCTC AATCGCCACC GGCAACCCGT CGCATTGGGA
CCGGGTGTGC TATTCGGCGG CGGACTACTG AGTATACGCG GTCGCCTGCG ACTCCTCGGC
GAGCCCTTTC AGCCACCGCA TCCGACGCCG GATGGCGAGG AAAGCATAGC CGACTTCGTC
CGGCGACGTC TCGGAGACGA GGCCCTCACC TGGCTGGTCG ACCCTTTTGT TTCCGGCGTC
TTTGCCGGCA ATCCTGCACG CCTTTCGGTG CAGGCCACTC TGCCCCGCCT GGCCGCGCTG
GAGCAGGATG GCGGCTCGCT CCTGCGCGGT GCGCTGCGTG CCCGGAAGAA GAAGTTGCCC
GGCACCCCCA AAACCCGCCT CGTGTCCTTT CGCGAAGGCC TGCAGGTCCT CCCTTTGCGG
GTTGCAAACA CACTCGGCGA TACGCTGCGC TGCGATACTC CGGTCGACCA GTTGGCCTAT
AGCGGCGACA TGTGGCAGGT CGGCAGCGGT AACCAGACCT GGCAAAGCAA ACGGCTCGTT
CTCGCCCTGC CTGCAGGCGC CGCGGCCAGA CTGCTCGCGC AAACCGACGC TACGCTTGCC
CGGGAACTGG ACGCCATCCC TTATCCTGCC GTAGGCAGCC TGTCCATAGG TTTTCGGCGC
CCACAGGTAG AGCATCCACT GGATGGCTTC GGCATGCTGA TTCCGCGAGT CATGGGGCTG
GAAACACTGG GGGTGCTTTT CTCCTCCACC CTTTTCCCCG GGCGCGCACC GGCGGGGCAG
GTATTGCTGA CGGCCTTTAT CGGTGGCAGT CAGAATGTCC TTGCCGGACG GGACGATGAC
GACCTGCTGG CAACGGTATT ACGCGAGATC GGCCCACTGC TGGGGATCAG TGGCGATCCC
GTTTTCAGTC GCTGCCGGGT CTGGCCGAAA GCCATCCCGC AATACGAAAT CGGACACCTG
GACCGGATGA AGCGGATCGA CACCCTGAGT GCCGGGCACC CCGGGCTGCA CTTCCGTGCC
AACTGGCAGG GAGGCGTCGC CCTGGGAGAT TGTATCGAAC AGGCCTGGGA GTTCAGTCAG
ACCGCCGACT GGCAGCATTG A
|
|---|
| Protein sequence | MEEVIIIGGG ISGLATAYFL RKRGWSPLLL EAGAAPGGNL QSRQEEGYLR DMGPNSLMLK
GRIVPEWLRE LQLEGDIVEA NPLAGRRYVL NRHRQPVALG PGVLFGGGLL SIRGRLRLLG
EPFQPPHPTP DGEESIADFV RRRLGDEALT WLVDPFVSGV FAGNPARLSV QATLPRLAAL
EQDGGSLLRG ALRARKKKLP GTPKTRLVSF REGLQVLPLR VANTLGDTLR CDTPVDQLAY
SGDMWQVGSG NQTWQSKRLV LALPAGAAAR LLAQTDATLA RELDAIPYPA VGSLSIGFRR
PQVEHPLDGF GMLIPRVMGL ETLGVLFSST LFPGRAPAGQ VLLTAFIGGS QNVLAGRDDD
DLLATVLREI GPLLGISGDP VFSRCRVWPK AIPQYEIGHL DRMKRIDTLS AGHPGLHFRA
NWQGGVALGD CIEQAWEFSQ TADWQH
|
|---|
| |