Gene AFE_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0562 
Symbol 
ID7136107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp500146 
End bp501009 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID643528969 
ProductyicC family protein 
Protein accessionYP_002425054 
Protein GI218667393 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGCA GTATGACCGG GTTCGCCCGT TGTGAAAGTC GTGGGGCCTG GGGCACACTG 
GCCTGGGAGT TGCGTACTGT AAATCACCGT TTTCTGGACG TCGGTTTGCG CCTTCCCGAG
GGCTTGGGCG CCCTTGAAGC AGCGGTGCGG ACCCGCCTGC AAAAAACGCT GGCGCGCGGT
CGGGTGGACG CCTGGTTACG TTTTCAGCCT GCTGCCGGCG GGTCATTATG CCTCAACACG
GCACTGGCGA CGGAGTTGCG CGGACTTTAC GGGGAATTGG CGGATATATG GGAATTTGAA
GAAACCGCCT TCAACCCTTG GGATGTACTG CGCTGGCCGG GCATGGTGCA GGCCTCCGGC
ATCGATACGG AGGCGCTGGA GGCGGAAGTA CTTGCGCTGC TGGACACCGC GCTGACCGGA
TTGCAGGAGG CACGCGAGCG GGAAGGCGCC GCCCTGACGC AACTGCTGCT CAGTCGCGTC
GATGCCATTG CGGGGCAGAC TGCGGCGCTG CGTGATCACC TGCCACACCT GGAAAAGGCG
TTGCGCGAAC GTTTGCAGGC CCGCTTGCAC GATTCGGCAC AGCAGGTGGA TGCAGGGCGC
TGGGAGCAGG AGTTGCTCTT CTATCTGCAA CGTCAGGATG TAGCCGAGGA GTTGGACCGT
CTGGATACCC ATCTGGCGGA ATTACGGCGT GTTTTACAGC GGCGGGAGGC GGCGGGACGA
CGCCTCGATT TCCTCATGCA GGAGCTCAAT CGCGAGGCCA ACACCCTCGC TTCCAAGGCC
GGAGACAGCC AGGTAACCTT TGCTTCGGTA GAGCTGAAAG TGCTCATCGA ACAGATGCGG
GAGCAGGTGC AGAATGTGGA GTGA
 
Protein sequence
MIRSMTGFAR CESRGAWGTL AWELRTVNHR FLDVGLRLPE GLGALEAAVR TRLQKTLARG 
RVDAWLRFQP AAGGSLCLNT ALATELRGLY GELADIWEFE ETAFNPWDVL RWPGMVQASG
IDTEALEAEV LALLDTALTG LQEAREREGA ALTQLLLSRV DAIAGQTAAL RDHLPHLEKA
LRERLQARLH DSAQQVDAGR WEQELLFYLQ RQDVAEELDR LDTHLAELRR VLQRREAAGR
RLDFLMQELN REANTLASKA GDSQVTFASV ELKVLIEQMR EQVQNVE