Gene AFE_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0556 
SymbolileS 
ID7134286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp493357 
End bp496170 
Gene Length2814 bp 
Protein Length937 aa 
Translation table11 
GC content62% 
IMG OID643528963 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002425048 
Protein GI218667361 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATA AGCAGACCCT CAACCTTCCT AAAACCGGTT TTCCCATGCA GGGAAAACTG 
CCGGAGCGTG AACCCGCGAC TCTGACCCGC TGGCAGGAGC ACGATCTATA CGGGGCGTTG
CAGAAGGCGC GTGCCGCAAG CCCCGCGTTC ATCCTGCATG ATGGCCCGCC CTACGCCAAC
GGCAAGATTC ATATCGGTCA TGCGGTCAAC AAGGTGCTCA AGGATATCGT CAACAAAAGC
AAGCTGAGTG AAGGCTTCCG GGTGCCATAT GTGCCGGGCT GGGACTGCCA CGGGCTGCCC
ATCGAAATCC AGGTGGAAAA GGAACTGGGG CGTCCCGACG AAAAAGTCAG TGCCCAGGCC
TTCCGCAATG CCTGCCGTGC CTATGCCGAA GGCCAGATTG TCGGGCAACG GCAGGATTTT
GAGCGCCTCG GCATCATCGG AGATTGGGGA AACCCCTACC TCACCATGCA CTTCCAGGCT
GAGGCCAATA TCCTGCGGGA GCTCGGTCGC CTGACCGTGA GCGGCCAGGT GGTACGCGGT
GCCAAGCCGG TACACTGGTG TGTGGACTGC GGCAGTGCTC TGGCGGAGGC GGAAGTGGAA
TATCAGGATC GCAGCGATCC TTCCATCGAC GTCGCCTTCG TCGTCGCTGA CGCCCCCGAT
CTGAGCCAAC GCCTTGGCCT CGCTGAACCC ATAGAGGCCA GCGTGGTGAT CTGGACGACC
ACGCCGTGGA CTCTGCCCGC CAATCAGGCG GTAGCCCTGC ACCCGGAATA CACTTACGTA
TTGCTGCGCT CCGGCAACCG ACATCTGATC CTCGCCGCAG ATCTGGCAGA AAGCGCCCTC
GCCCGCTATG GTCACCCGGA AGCGGAGGTG CTGGCAGAGT TCGCCGGTGT GACGCTGGAG
GGCCTCCGCC TCAAACACCC CTTCCTGGAT TACGAAGTGC CTGTCATCCT CGGTCGGCAT
GTGACCCTGG AAGCGGGCAC CGGCTGCGTA CATACTGCCC CGGCCCACGG CGCGGACGAT
TATGAAGCAT CCCGGCGTTA TCACCTGCCG GTGGACAGTC CCGTGCTCGG CAACGGCCGT
TTTCAGGACG AACTGCCGCT GGGACTGGGA GGCATCACCG TACAGGAGGC CAATGAGCGG
ATCCCTGAAC TCCTGCGCGG GCGCAATGCC CTGCTCCATT TCGAGAAGAT CCGCCATAGT
TACCCCCATT GCTGGCGCCA TAAGACACCG CTACTCTTCC GCGCTACCCC TCAGTGGTTT
ATCAGCATGA GCGCCAATGA CCTGCGTGAG AAGGCCATCG GCGCCATCGA AGCCACCCGG
TGGATTCCCG ACTGGGGCAA AGACCGCATC ACCGGCATGG TCCACCAGCG TCCGGACTGG
TGCATCTCCC GGCAAAGGGC CTGGGGTGTG CCCGTCGCGA TCTTCTCCTG TACCCGGTGC
GGCGAGCCCC TACGCGATGC CGACACCTTC GAACGTATCG CCCGCGCGGT GGAAACGGGT
GGGGTCGATG CCTGGTTCAA CCACCCGGAC AGCGATTTCC TGCCTGCGGA TGCGCGCTGC
AGCGGTTGCG GCCACGATCA CTTTCACAAG GTCACGGACA TTCTCGACGT CTGGTTCGAC
TCCGGCTGCA CCCACGCCTT TGTACTGGAG CAGAGGCCTG AGTTGCACAG CCCCGCCGAC
CTTTATCTGG AAGGCTCCGA TCAGCATCGC GGCTGGTTCC AGTCTTCCCT GCTGGAATCC
GTCGCCAGCC GAGGAAGGGC GCCCTACCGG GCGGTACTGA CCCACGGCTT CACCGTCGAT
GGCGAAGGCC GGAAGATGAG CAAGTCCGTG GGCAACGTCA TCGCCCCACA GACGATCATC
GACCGTTACG GCGCGGACAT CCTGCGACTC TGGGTGGCAT CGGAGGACTA CCGCAGCGAG
ATCCCCATCT CCGACACCAT CCTCCAGCAA CTGGGCGACA GCTACCGGCG CATCCGTAAT
ACGGCCCGCT ATATGCTGGG CAACACCCAC GACTTTAATC CAGCCACGGA CGCCCTGCCC
ACGGCGGATC TGCTGGAAAT GGACCGCTGG ATGCTGGCCC GTACCGCGCT CCTGCAGGAA
GAAATTCGTG CGGCCTACAG CGAATATCAA TTCCTCCGCG TCCAGCAGCG TCTGCACCAC
TTTTGCTCGG TGGAGCTGGG GGGACTCTAT CTGGATGTGC TGAAAGATCG CCTCTACACC
ACCCCCGCAG CCTCGCGGGC GCGGCGTTCG GCGCAGACGG TGCTCTGGCA GATACTCGAA
GCCATGGTGG TATGGATGGC CCCCATCCTG AGCTTCACTG CTGAAGAAAT CTGGGACGGG
ATGGGCAATC GCCCATTCTC CAGCGTGTTT TTTGCGCAAT ATCCGGAAAT ACCCCTGCCT
GCCGACAGCG AAGTCCTGAT GGGACGCTGG GAACGGCTCG GTCAGTTGCG GGACGCCGTC
AACGCCGCAC TGGAACCCCT GCGTCAGGAG AAAAAGATCG GCTCGGGCCT GGACGCAGAA
GTCGCCCTCT ACGCCAACAG CGAATGGCAT GAGTTTCTTG CACCACTCGG CGAGGAGCTG
CGCTTTTTCC TGCTGAGCTC CGCGTGTGCC CTGCGCCCCT ACGAAGAGCG CCAGGAGGGT
TGCGACGATG CGCTTCCGGG CATCGCCATA CAGGTCCGGC CCAGTGATGG CCAGAAGTGC
GCACGCTGCT GGCACCGCCG CCCGGACATC GGTCTCCATG CGGGGCATCC GGACATTTGC
GACCGTTGTG TGGAGAATCT CGCCTTACCC GGAGAAACAC GGGAGTTCTG CTGA
 
Protein sequence
MDYKQTLNLP KTGFPMQGKL PEREPATLTR WQEHDLYGAL QKARAASPAF ILHDGPPYAN 
GKIHIGHAVN KVLKDIVNKS KLSEGFRVPY VPGWDCHGLP IEIQVEKELG RPDEKVSAQA
FRNACRAYAE GQIVGQRQDF ERLGIIGDWG NPYLTMHFQA EANILRELGR LTVSGQVVRG
AKPVHWCVDC GSALAEAEVE YQDRSDPSID VAFVVADAPD LSQRLGLAEP IEASVVIWTT
TPWTLPANQA VALHPEYTYV LLRSGNRHLI LAADLAESAL ARYGHPEAEV LAEFAGVTLE
GLRLKHPFLD YEVPVILGRH VTLEAGTGCV HTAPAHGADD YEASRRYHLP VDSPVLGNGR
FQDELPLGLG GITVQEANER IPELLRGRNA LLHFEKIRHS YPHCWRHKTP LLFRATPQWF
ISMSANDLRE KAIGAIEATR WIPDWGKDRI TGMVHQRPDW CISRQRAWGV PVAIFSCTRC
GEPLRDADTF ERIARAVETG GVDAWFNHPD SDFLPADARC SGCGHDHFHK VTDILDVWFD
SGCTHAFVLE QRPELHSPAD LYLEGSDQHR GWFQSSLLES VASRGRAPYR AVLTHGFTVD
GEGRKMSKSV GNVIAPQTII DRYGADILRL WVASEDYRSE IPISDTILQQ LGDSYRRIRN
TARYMLGNTH DFNPATDALP TADLLEMDRW MLARTALLQE EIRAAYSEYQ FLRVQQRLHH
FCSVELGGLY LDVLKDRLYT TPAASRARRS AQTVLWQILE AMVVWMAPIL SFTAEEIWDG
MGNRPFSSVF FAQYPEIPLP ADSEVLMGRW ERLGQLRDAV NAALEPLRQE KKIGSGLDAE
VALYANSEWH EFLAPLGEEL RFFLLSSACA LRPYEERQEG CDDALPGIAI QVRPSDGQKC
ARCWHRRPDI GLHAGHPDIC DRCVENLALP GETREFC