| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0555 |
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| Symbol | lspA |
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| ID | 7135611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 492899 |
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| End bp | 493357 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643528962 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_002425047 |
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| Protein GI | 218665135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.803857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCGCT ATTTATGGTT ATCGTTCGGG GTCATCCTGC TGGATCAGGG CGTCAAACTC
TGGCTGAGCC ACATCTGGCG GGTGGGGCAG GGCCTTGTCA TCATTCCGGG GCTGCTCAAT
TTTCGTCTCG TCCACAACAC CGGTGCCGCC TTCAGCTTTC TGGCGGGGGC TGGCGGCTGG
CAACGCTGGC TGCTCATCGG CGTCGCCCTG CTGGTGGTGG TGGTCATCGT CGCCATCCTG
CGTCGGCTCA AGCCCGGCGC CACCTGGACC GCCATATCCC TTGCCCTGAT TCTCGGCGGT
GCGGTGGGCA ACCTGATCGA CCGGATCCGC CTCGGCTATG TGATCGATTT TATTGGCGCC
CACTGGGGCA GCCTCTACTG GCCCTACTTC AACATCGCCG ACAGCGCCAT CTCCATCGGA
GCCGTGATAC TGGTCCTGGA CGCTTTCCGG CGCCATTAA
|
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| Protein sequence | MLRYLWLSFG VILLDQGVKL WLSHIWRVGQ GLVIIPGLLN FRLVHNTGAA FSFLAGAGGW
QRWLLIGVAL LVVVVIVAIL RRLKPGATWT AISLALILGG AVGNLIDRIR LGYVIDFIGA
HWGSLYWPYF NIADSAISIG AVILVLDAFR RH
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