Gene AFE_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0547 
SymbolilvE 
ID7135262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp479750 
End bp480673 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content59% 
IMG OID643528954 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_002425039 
Protein GI218666695 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATGG CGGAACGCGA CGGTTTTATC TGGTTTGACG GCAAGATGGT CCCTTGGCGG 
GAGGCCACCG TGCACGGTCT TACCCACAGC CTGCACTACG GCATGGGCTG TTTCGAAGGG 
GAACGAGCCT ATGCCACGCC CCAGGGCACC GCTATTTTCC GCCTGCCGGA GCACACCAAC 
CGTCTCTTTA ACAGCGCCAA GATTTTGCAG ATGGATACCC CTTTCACGCA GGACCAGATC 
AACGACGCCA CCAAGGAAGT CATCCGCGCC AATCATCTGG AATCCGCCTA TATCCGCCCC 
CTGTTCTTCT ATGGCGCTGA AGGTATGGGC TTGTCCGCTA AGGGGCTCAA GGTCCATGTG 
CTCATTGCCG CCTGGAGCTG GGGCAGCTAT CTGGGCCAGG AGGCACTGGA AAAGGGCATC 
CGCGTCAAGG TGAGCTCCTT CAGCCGCCAC CACGTCAACG TACATCTGTG CAAGGCCAAG 
GCCACCGGCA ACTACATGAA CTCCATGCTG GCCCAGCGTG AGGCGGCCTC CTGCGGCTAC 
GACGAGGCCC TGTTACTGGA CCGCGAGGGT TATGTGTCTG AAGGTTCCGG TGAAAATGTT 
TTCATGATTC GTGACGGCAT TCTTTATACG CCAACGCTGA CCAGCGCCCT CGAGGGCATC 
ACCCGCGACA CCATCCTGCG TTTTGCCCGG GATGCCGGCA TTCCCATCGT CGAGAAGCAA 
TTGACCCGTG ATGAATTCTA CATCGCCGAC GAAGCTTTCT TTACCGGTAC CGCTGCCGAA 
GTCACCCCCA TCCGCGAAAT CGATGGTCGG GTCATTGGCG AAGGGTGTCG CGGCCCGATC 
ACGGAAATGC TGCAAAGTCG CTATTTCGAC ACCGTCGCCG GGCGCCGTGA GGACCACCCG 
GAATGGTTGC ACCACGTAGG CTGA
 
Protein sequence
MSMAERDGFI WFDGKMVPWR EATVHGLTHS LHYGMGCFEG ERAYATPQGT AIFRLPEHTN 
RLFNSAKILQ MDTPFTQDQI NDATKEVIRA NHLESAYIRP LFFYGAEGMG LSAKGLKVHV 
LIAAWSWGSY LGQEALEKGI RVKVSSFSRH HVNVHLCKAK ATGNYMNSML AQREAASCGY 
DEALLLDREG YVSEGSGENV FMIRDGILYT PTLTSALEGI TRDTILRFAR DAGIPIVEKQ 
LTRDEFYIAD EAFFTGTAAE VTPIREIDGR VIGEGCRGPI TEMLQSRYFD TVAGRREDHP 
EWLHHVG