Gene AFE_0545 details

Gene Information

• Locus tag: AFE_0545
• Symbol: dsbD
• ID: 7137311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 477663
• End bp: 479513
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643528952
• Product: thiol:disulfide interchange protein DsbD
• Protein accession: YP_002425037
• Protein GI: 218667063
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4232] Thiol:disulfide interchange protein

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.221768
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAGGA ACGACGTGGG TATGAGAGCC GGAAACGGGA GAAGGGCCGG TTGGGCCATG 
GGTGTCCAGT TGTGGAGCGG AATTTGCGGT GTCCTGCTAT TGTCCTGGCT GTCTCTCGGC 
TGTGCCGGTA CGTTTCTGAC CCCGGATCAG GCATTTCATT TTGAAGCGCG GCTGAGTGGC 
CGGCACCAGT TGCAACTGCA CTGGGATGTG GCGCAGGGAT ACCACCTGTA CCGCGATCGG 
ATCAAGTTCT CCGTGACGCC GAGCAATGTG CTGCTAGGGC ATTATACATT GCCCGCAGGA 
GTGGAGCTGA ACGACCCGGT TTTCGGCAAG ACACGGGTAT TGGAAGGGAA AAATACCCTC 
ACCGTACCTT TTACCGTCCA GGGAACCGCC CCTGCTTTCA TTGAACTGAA ATCTACCTAT 
CAGGGCTGTG CCAATGCGGG TGTTTGCTAC CCGGAGCAGG TCAAGACGAT CAAGCTGGCC 
TTGACCCAGC AGGCCGTGCC GCCCCCGGCG GCGGTGCCGG TCGTGCCCCC GCCGGGGACG 
GCGGTCCCGG CTGCTGCGGT CAGCCCCGTG AATGATGCCG GGGCGCTGGC AGGGGCTTTG 
CGTGACAGCT TCTGGCTCAC CTTGGGTCTC TTTTTTATCT CTGGACTGGG TCTGGCCTTT 
ACGCCCTGTA TTTTTCCCAT GATTCCTATC CTCTCCGCCC TGATCGTCGG TAAGGAGGCA 
GGGCGCGGCC CGCAACGGTC ACGCGCCCTG GGGCTTTCCG TCGCCTATGT GCTGGGAATG 
TCGCTGACCT ACAGTATTGC CGGGGTGCTG GCGGCGGTGA GCGGCGCCTA TATGCAGGCG 
GCCTTCCAGA GTCCCTGGGT GCTGGGGGCT TTTGCCTTTG TTTTTGTGCT GCTGGCGCTG 
TCCATGTTCG ATTTTTACGA GCTGCAAATG CCGAGTGGCA TTCAGACACG TCTGGCCGGC 
ATGGGACGGG GCGGGCACCT GTTCAGTACC TTTGTCATGG GGGTACTGTC AGCGCTGATC 
ATCGGGCCCT GCGTGGCCGC CCCCCTGGCA GGCGGGCTGC TCTTCATTTC CCAGACGGGA 
GATGTTTTTC TTGGTGGATT GTCACTGTTC GCTCTGAGCC TGGGGATGGG CGTGCCCCTG 
CTGATCATCG GTACTTCCGC CGGGCATTTT CTACCGCGGG TTGGTGCCTG GATGAATGCC 
GTTAAGGCGG TTTTCGGTGT AGTGCTGCTG GGCGTCGCCA TCTGGTTGCT GACACGAGTT 
CTGCCGGGGC CCGTCAGCTT GGCCCTATGG GCAGCGCTGG CAGTCATCAG TGCCATCTAT 
CTCGGGGCGT TGGACGCAAT CCCGGCGGGT GCTTCGGGCT GGCGCCGTTT CTGGAAAGGC 
CTCGGAGTGC TCATGCTGGT GTACGGCCTG GTCATGGGTG TGGGGGCGCT GGGCGGCGCC 
AGCGATCCCC TGCAACCCCT GACAGGCTAT ACGGCGGCGG TGCCGCCCGA AAACCGGGCC 
GAGGCCCTGC ATTTTACTAC CGTGAAAACC CCCGAGGCCC TGCAGAGCGC ACTGGTACAG 
GCCAGGGGCA GACCGGTGCT GGTGGATTAC TGGGCAAGCT GGTGCGTGGA ATGCCTGCGC 
ATGGATAAAG TCACGTTTGC CGATCCGCAG GTGGTGGCCG CCCTACGAAA GCGGCTGCTG 
ATCCGCGTGG ATGTGACTCA GGATGATGCG GCCAGTCGCG CCCTCCTGAA GCGTTACAAC 
CTGGTGGGCC CCCCGGCTTT CATCGCTGTA GCCGCAGATG GCAGGACGAC GGCGCAGCAG 
GAGGGATATC TGGGGCCGGA GGCGTTTATG GGGTGGTTGC ACCAATCCTA G 

 

Protein sequence

MARNDVGMRA GNGRRAGWAM GVQLWSGICG VLLLSWLSLG CAGTFLTPDQ AFHFEARLSG 
RHQLQLHWDV AQGYHLYRDR IKFSVTPSNV LLGHYTLPAG VELNDPVFGK TRVLEGKNTL 
TVPFTVQGTA PAFIELKSTY QGCANAGVCY PEQVKTIKLA LTQQAVPPPA AVPVVPPPGT 
AVPAAAVSPV NDAGALAGAL RDSFWLTLGL FFISGLGLAF TPCIFPMIPI LSALIVGKEA 
GRGPQRSRAL GLSVAYVLGM SLTYSIAGVL AAVSGAYMQA AFQSPWVLGA FAFVFVLLAL 
SMFDFYELQM PSGIQTRLAG MGRGGHLFST FVMGVLSALI IGPCVAAPLA GGLLFISQTG 
DVFLGGLSLF ALSLGMGVPL LIIGTSAGHF LPRVGAWMNA VKAVFGVVLL GVAIWLLTRV 
LPGPVSLALW AALAVISAIY LGALDAIPAG ASGWRRFWKG LGVLMLVYGL VMGVGALGGA 
SDPLQPLTGY TAAVPPENRA EALHFTTVKT PEALQSALVQ ARGRPVLVDY WASWCVECLR 
MDKVTFADPQ VVAALRKRLL IRVDVTQDDA ASRALLKRYN LVGPPAFIAV AADGRTTAQQ 
EGYLGPEAFM GWLHQS