Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0542 |
Symbol | groEL |
ID | 7134737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 474399 |
End bp | 476054 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643528949 |
Product | chaperonin GroEL |
Protein accession | YP_002425034 |
Protein GI | 218667216 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0884836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCCA AACAAGTAGC CTTTGCTGAA CATGCCCGCG AGAAGATGTT GCGTGGCGTT AACGTACTCG CCGATGCCGT CAAGGTCACC TTGGGTCCCA AGGGTCGTAA CGTGGTGCTC GACAAGTCTT TCGGCGCCCC CACCATTACC AAGGACGGCG TCTCCGTCGC CAAGGAAATC GAACTGGCTG ACAAGTTCGA GAACATGGGC GCGCAGATGG TGAAAGAAGT CGCCTCCCAG GCCTCCGACG AAGCCGGTGA CGGTACCACC ACCGCCACCG TTCTGGCCCA GGCCATCATC CGCGAAGGCC TCAAGGCCGT CATCGCCGGC ATGAACCCCA TGGACCTGAA GCGCGGCATC GACAAATCGG TCATCGTCGT CGTCGAGGAG CTGAAGAAGC AATCCAAGCC CTGCAAGACC CAAAAGGAAG TGGCCCAGGT AGGTACCATC TCCGCCAACT CTGACGACTC CATCGGCAAG ATCATTGCCG AAGCCATGGA GAAGGTCGGC AACGAAGGCG TCATCACCGT GGAAGAAGGT TCCGGCCTCG CCAACGAGTT GGACGTCGTC GAAGGTATGC AGTTCGACCG CGGTTACCTC TCCCCCTACT TCGTCAACAA CCAGGACAAG ATGGTTGCCG AACTGGAGAA TCCCTATATC CTCCTGCACG ACAAGAAAAT TTCCTCCATC CGCGACATGC TGCCCATCCT GGAGCAGGTC GCCAAGTCCA GTCGTCCGCT GCTGATCGTG GCCGAAGATG TCGAAGGCGA AGCGTTGGCC ACTCTGGTCG TCAACACCAT GCGCGGCATC ATCAAGGTCG CTGCGGTCAA GGCCCCGGGT TTTGGTGATC GTCGCAAGGC GATGCTCGAG GACATGGCCA TCCTGACCGG CGGCCGCGTG GTCTCCGAAG AAATCGGCAT GAAGCTGGAA AGCACCACCC TCGCCGATCT CGGCCAGGCC AAAAAGATTG TCATCGACAA GGAAAACACC ACCATGATCG ATGGCGCCGG TCAGCAGAGC GAGATCAAGG CGCGCGTTGA GCAGATCCGT CGTCAGATGG AAGATGCCAG CTCCGACTAC GATCGCGAGA AGCTTCAGGA GCGCGTGGCC AAGCTGGCCG GTGGCGTTGC CGTCATCAAG GTCGGTGCCG GTTCCGAGAT GGAAATGAAG GAAAAGAAGG CCCGTGTCGA AGACGCCCTG CATGCTACCC GTGCGGCCGT CGAAGAAGGC ATCGTCCCCG GCGGCGGTGT GGCGCTGGTC CGTGCCCGTC ATGCGCTGGA AGGCTTCAAG ACCGCCAACC ACGACCAGGA CATGGGTGTT GCCATCATCC GTCGCGCCAT CGAAGAGCCG TTGCGTCAGA TCGTCGCCAA TGCCGGCGGT GAAGGCAGCG TGGTTCTGAA CAAGGTTGTG GACGGTAAAG ACGGCTACGG CTACAACGCC GCGACCGACG AATATGGCGA CATGTTCGAG ATGGGCGTCA TCGACCCGAC CAAGGTCACC CGCACCGCGT TGCAGAAGGC CTCCAGCATT GCCGGCCTGA TGATCACCAC GGAAGCCATG GTCACCGAAC TGCCGAAGAA AGACGACAAG TCCGGCGGCG ATATGGGCGA CATGGGCGGC GGCATGGGCG GCATGGGTGG TATGGGCGGC TTCTAA
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Protein sequence | MPAKQVAFAE HAREKMLRGV NVLADAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAKEI ELADKFENMG AQMVKEVASQ ASDEAGDGTT TATVLAQAII REGLKAVIAG MNPMDLKRGI DKSVIVVVEE LKKQSKPCKT QKEVAQVGTI SANSDDSIGK IIAEAMEKVG NEGVITVEEG SGLANELDVV EGMQFDRGYL SPYFVNNQDK MVAELENPYI LLHDKKISSI RDMLPILEQV AKSSRPLLIV AEDVEGEALA TLVVNTMRGI IKVAAVKAPG FGDRRKAMLE DMAILTGGRV VSEEIGMKLE STTLADLGQA KKIVIDKENT TMIDGAGQQS EIKARVEQIR RQMEDASSDY DREKLQERVA KLAGGVAVIK VGAGSEMEMK EKKARVEDAL HATRAAVEEG IVPGGGVALV RARHALEGFK TANHDQDMGV AIIRRAIEEP LRQIVANAGG EGSVVLNKVV DGKDGYGYNA ATDEYGDMFE MGVIDPTKVT RTALQKASSI AGLMITTEAM VTELPKKDDK SGGDMGDMGG GMGGMGGMGG F
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