Gene AFE_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0518 
Symbol 
ID7135069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp448643 
End bp449236 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content61% 
IMG OID643528925 
Producthypothetical protein 
Protein accessionYP_002425010 
Protein GI218667930 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGGTG ATCCCCTCGC CATGCTACTT ACCCGTGTTC GCGAATGCGA ACTTTGCGCC 
GGACACCTGC CGCTTGGTGC GCGTCCGGTG CTGCAGATGG ATTCGCGCGC CCGTATTTTG
ATCGCTGCGC AGGCACCGGG CAGGAAGGTG CATGAAACAG GTATTCCCTT CAACGATGCC
AGCGGCGATA GGCTTCGTGC CTGGCTGGGT ATCTCCCGAG AAGTATTCTA CGACGCCCGA
CAGGTGGCGC TCGTACCCAT GGGATTCTGC TACCCAGGCA CAGGAACATC CGGAGACTTG
CCGCCGCGGC CAGAGTGCGC TCGTGCCTGG CATGGGGAAT TACTGCCGCA TTTGCAGCAT
CTGCAACTCA CCCTGGTCAT CGGCCAGTAT GCCCGGGCTT ATCACCTTCC CGCCGAGGCC
GGAACGCTGA CGGAGGTGGT TCATGCATGG CGCGAAAACT GGCCCAACCG GATACCGCTG
CCGCATCCCA GCCCGCGTAA TAATCTGTGG CTGAAGCGCA ATCCGTGGTT CGAGGAAGAT
CTCATTCCGA TGCTTCAGGC GCGCGTGGCC GAGGTGCTTG CGCAGGACCG TTGA
 
Protein sequence
MYGDPLAMLL TRVRECELCA GHLPLGARPV LQMDSRARIL IAAQAPGRKV HETGIPFNDA 
SGDRLRAWLG ISREVFYDAR QVALVPMGFC YPGTGTSGDL PPRPECARAW HGELLPHLQH
LQLTLVIGQY ARAYHLPAEA GTLTEVVHAW RENWPNRIPL PHPSPRNNLW LKRNPWFEED
LIPMLQARVA EVLAQDR