Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0518 |
Symbol | |
ID | 7135069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 448643 |
End bp | 449236 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643528925 |
Product | hypothetical protein |
Protein accession | YP_002425010 |
Protein GI | 218667930 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGGTG ATCCCCTCGC CATGCTACTT ACCCGTGTTC GCGAATGCGA ACTTTGCGCC GGACACCTGC CGCTTGGTGC GCGTCCGGTG CTGCAGATGG ATTCGCGCGC CCGTATTTTG ATCGCTGCGC AGGCACCGGG CAGGAAGGTG CATGAAACAG GTATTCCCTT CAACGATGCC AGCGGCGATA GGCTTCGTGC CTGGCTGGGT ATCTCCCGAG AAGTATTCTA CGACGCCCGA CAGGTGGCGC TCGTACCCAT GGGATTCTGC TACCCAGGCA CAGGAACATC CGGAGACTTG CCGCCGCGGC CAGAGTGCGC TCGTGCCTGG CATGGGGAAT TACTGCCGCA TTTGCAGCAT CTGCAACTCA CCCTGGTCAT CGGCCAGTAT GCCCGGGCTT ATCACCTTCC CGCCGAGGCC GGAACGCTGA CGGAGGTGGT TCATGCATGG CGCGAAAACT GGCCCAACCG GATACCGCTG CCGCATCCCA GCCCGCGTAA TAATCTGTGG CTGAAGCGCA ATCCGTGGTT CGAGGAAGAT CTCATTCCGA TGCTTCAGGC GCGCGTGGCC GAGGTGCTTG CGCAGGACCG TTGA
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Protein sequence | MYGDPLAMLL TRVRECELCA GHLPLGARPV LQMDSRARIL IAAQAPGRKV HETGIPFNDA SGDRLRAWLG ISREVFYDAR QVALVPMGFC YPGTGTSGDL PPRPECARAW HGELLPHLQH LQLTLVIGQY ARAYHLPAEA GTLTEVVHAW RENWPNRIPL PHPSPRNNLW LKRNPWFEED LIPMLQARVA EVLAQDR
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