Gene AFE_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0485 
Symbol 
ID7135658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp426721 
End bp427341 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID643528896 
ProductMotA/TolQ/ExbB proton channel family protein 
Protein accessionYP_002424981 
Protein GI218667894 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.18294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGAGT TGCTGGGATT GTTCAAGTTA GGCGGATTTG TTCTGCCGAT TCTCATTTTG 
GCGGCAATCG TCGCTTTGGC CATCGCCGGT AATCGTCTCT GGGTCTTGCG GCGGGGACGT 
ATTGCACCGC GTGATCTCGC GCCCCGGGTC GGGGAACTGG TGGACGCGGG CAAGGTGCAG 
CAGGCCGTCA AGGTGCTGTA TGAAAACGAC ACGCCCCTGG CCAGGATGAT GTTGGTGGCG 
CTCCAGAGCG CGGGACAACC GCGCGACGTG ATCAAGGAGT CGGTGGAAGA GACCGGCCGT 
CATGAAGTGG CGCATCTCGA TCGATACCTC AACTTTCTGG GTAGTATCGC CGGTGTGGCG 
CCCTTGCTGG GTCTGCTTGG AACCGTATTC GGCATCATGC ATGCTTTTGC GGCTATCGGC 
ATGGTGGGCG CGGGCGATCC CAAGGCGTTG GCGAGCGGCA TCGCCGAGGC GCTCATCACC 
ACCGCCAGCG GTCTTATCGT CGCTATCCCC AGCCTGATGT TCTATCGCTA TTTCAAAGGG 
CGGGTCGATG CGCTGGTGTT GTCCCTCGAA AAAGAGGCGC TGAAGCTGGT GAATCAGATA 
GCCGCGGGGA CGGAAAAATG A
 
Protein sequence
MQELLGLFKL GGFVLPILIL AAIVALAIAG NRLWVLRRGR IAPRDLAPRV GELVDAGKVQ 
QAVKVLYEND TPLARMMLVA LQSAGQPRDV IKESVEETGR HEVAHLDRYL NFLGSIAGVA 
PLLGLLGTVF GIMHAFAAIG MVGAGDPKAL ASGIAEALIT TASGLIVAIP SLMFYRYFKG 
RVDALVLSLE KEALKLVNQI AAGTEK