| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0483 |
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| Symbol | lolD |
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| ID | 7135622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 423181 |
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| End bp | 423876 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643528893 |
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| Product | lipoprotein releasing system, ATP-binding protein LolD |
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| Protein accession | YP_002424978 |
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| Protein GI | 218667961 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAGC AGATCATTCT TTCCGTCGAG CATCTGCGGC AGAGCTTTGC CATTGGCCGC
GAGCGTCTGG AGGTCATCCG TGACGTCAAT CTGCAGGTGC GTCCCGGCGA ACGCCTGGCG
ATTGTCGGCG CCTCCGGGCA GGGCAAAAGC ACTCTGATGC ACCTCATGGG TGGTCTGGAG
CGCCCGTCGG GGGGAGTAGT GCGGATCCTC GGGCAGGAGG TTTACAAACT CAGCGAATCG
GCGCGCAGTC GTTTGCGCAA TCAGAGTGTC GGTTTCGTCT ATCAGTTACA CCGTTTGCTG
CCCGAGTTCA CGGCACTGGA GAATGTCCTG CTCCCTCTCC TGATACGCCG GGTGCCGCGT
CGCTCCGTAG AACCCTGGGG CAAGGAAATC CTGACCCGTG TCGGTCTGAG TGAGCGCCTG
GATCACAAAC CCGGCATGCT CTCCGGTGGC GAACGGCAAC GGGTTGCGCT GGCGCGTGCG
CTGGTCACCC GTCCGGCACT GCTTCTCGCC GACGAACCCA CCGGCAATCT CGACAGCGAG
TCGGCGGAGA GCGTCCACCA ACTGATGCTC GACCTCAATC AGGAACTGGG TACCGCACTG
GTTATCGTCA CCCATGAGCC GGCGCTGGCG GCACACATGG AGCACGTACT CCGGCTGCAG
GATGGCGTCC TGCAGCCCCT GGACGCTGTG CACTAA
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| Protein sequence | MSEQIILSVE HLRQSFAIGR ERLEVIRDVN LQVRPGERLA IVGASGQGKS TLMHLMGGLE
RPSGGVVRIL GQEVYKLSES ARSRLRNQSV GFVYQLHRLL PEFTALENVL LPLLIRRVPR
RSVEPWGKEI LTRVGLSERL DHKPGMLSGG ERQRVALARA LVTRPALLLA DEPTGNLDSE
SAESVHQLML DLNQELGTAL VIVTHEPALA AHMEHVLRLQ DGVLQPLDAV H
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