Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0478 |
Symbol | |
ID | 7135410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 418785 |
End bp | 419189 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643528889 |
Product | virulence-associated protein, putative |
Protein accession | YP_002424974 |
Protein GI | 218667984 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGTTATC TGCTGGATAC CAATATCTGC ATTTATATTG CCAAACACCA TCCGCCCGCC GTGCGGGAGC GTTTTGTACA ACATGGTGCC GATGATCTGG CGATGTCGGT AATCACCTTG GGTGAATTGT GTTGGGGTGC GGAAAAAAGT CAGGCGCGTG ACAAAGCGTT GGCCAGCATA CAGCGCCTGC AAGAACGTAT TCAGGTGGCC CCCCTCACCC CTCAGGTCGG CATCCACTAT GGCCAGATCC GCGCGGCTCT GGAAAGCGGC GGGCGGCCCA TTGGCAATAA TGATCTGTGG ATCGCCGCAC ACGCCCGCGC CGAAGGCTGG ATCGTAGTTA CCAACAATGA ACGAGAGTTC CGACGGGTGG AAGGATTGCA AGTGGAAAAC TGGGTAACGG CATGA
|
Protein sequence | MRYLLDTNIC IYIAKHHPPA VRERFVQHGA DDLAMSVITL GELCWGAEKS QARDKALASI QRLQERIQVA PLTPQVGIHY GQIRAALESG GRPIGNNDLW IAAHARAEGW IVVTNNEREF RRVEGLQVEN WVTA
|
| |