Gene AFE_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0478 
Symbol 
ID7135410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp418785 
End bp419189 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content56% 
IMG OID643528889 
Productvirulence-associated protein, putative 
Protein accessionYP_002424974 
Protein GI218667984 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGTTATC TGCTGGATAC CAATATCTGC ATTTATATTG CCAAACACCA TCCGCCCGCC 
GTGCGGGAGC GTTTTGTACA ACATGGTGCC GATGATCTGG CGATGTCGGT AATCACCTTG
GGTGAATTGT GTTGGGGTGC GGAAAAAAGT CAGGCGCGTG ACAAAGCGTT GGCCAGCATA
CAGCGCCTGC AAGAACGTAT TCAGGTGGCC CCCCTCACCC CTCAGGTCGG CATCCACTAT
GGCCAGATCC GCGCGGCTCT GGAAAGCGGC GGGCGGCCCA TTGGCAATAA TGATCTGTGG
ATCGCCGCAC ACGCCCGCGC CGAAGGCTGG ATCGTAGTTA CCAACAATGA ACGAGAGTTC
CGACGGGTGG AAGGATTGCA AGTGGAAAAC TGGGTAACGG CATGA
 
Protein sequence
MRYLLDTNIC IYIAKHHPPA VRERFVQHGA DDLAMSVITL GELCWGAEKS QARDKALASI 
QRLQERIQVA PLTPQVGIHY GQIRAALESG GRPIGNNDLW IAAHARAEGW IVVTNNEREF
RRVEGLQVEN WVTA