Gene AFE_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0474 
SymbolthrC 
ID7136358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp414427 
End bp415557 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID643528885 
Productthreonine synthase 
Protein accessionYP_002424970 
Protein GI218667183 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTT ATACCGGCAT TATCGACCAT TACCGCGCCT TCCTGCCCCT GGCTCCTGAA 
ACCCCGGCGG TGAGCCTGGG TGAGGGCAAT ACGCCACTGA TCGAGTGTAT CAACCTGCCC
CGCCAGCTTG GCCTCGATCT CCGCCTTTTC CTCAAATTTG AGGGCCTGAA TCCCACCGGC
TCCTTCAAGG ACCGTGGTAT GGCCATGGCG GTGACCAAGG CCAAGGAAGA CGGCAGCGAG
ATGGTGATCT GCGCCTCCAC CGGCAACACT TCGGCGGCAG CGGCGGCCTA TGCGGCGCGG
GCGGGAATGC GCGCCTTCGT GGTGATTCCG GAAGGCAAGA TTGCCCTCGG CAAGCTCTCT
CAGGCGATGA TGCATGGTGC CATGGTGTTG CAGATTCGCG GCAACTTCGA TGCGGGCATG
CAGATCGTCC AGGAAGTGGC GGCCAATGCG CCGATTACCC TGGTGAATTC GGTTAACCCT
TACCGCTTGC AGGGTCAGAA GACGGCGGCC TTCGAGATTA TCGAAGCATT GGGTGAAGCG
CCCGATTATC ACGCCCTGCC CGTGGGGAAT GCCGGCAATA TCACCGCCCA CTGGATGGGC
TATTGTGAAG CCACCGATGG ACGGACCGAT AAGTCCCAGC CCTTGACCGC CTCCTGCAAG
TTCTGTAATG GCACCTGTAG CTACGGTCAC GGTAAGGCCG GAAAACGACC GAAGATGCTG
GGTTTTCAGG CGGCAGGCAG TGCCCCCTTC ATCGTCGGCC ACTACGTGAA GGACCCCGAG
ACCATCGCCA CGGCCATCCG TATCGGCCAC CCCATGTCCT GGGATCAGGC GCATCGGGTG
CAGGCGGAAA GCGGCGGCTG GTTTGGCAGT CATAGCGATG CCGAGATTCT GGAAGCGCAG
CGCTGGCTGG CGCAATATGA GGGCGTTTTC TGCGAACCGG CCTCGGCGAC TTCGGTGGCG
GGGGTGGTTG CTGAGGCCCG CGCCGGAAAA ATTGAAGCCG GTGCGACGGT AGTCTGTACT
CTCACCGGGC ATGGCCTGAA AGATCCCGAT ACCGCCATCG CTCAGGGTGG CGAAGTGCTC
ACCGTGGATG CCAGTCTGGA GGCGGTGCAG CGCGCCATCC TGGATCGCTG A
 
Protein sequence
MSRYTGIIDH YRAFLPLAPE TPAVSLGEGN TPLIECINLP RQLGLDLRLF LKFEGLNPTG 
SFKDRGMAMA VTKAKEDGSE MVICASTGNT SAAAAAYAAR AGMRAFVVIP EGKIALGKLS
QAMMHGAMVL QIRGNFDAGM QIVQEVAANA PITLVNSVNP YRLQGQKTAA FEIIEALGEA
PDYHALPVGN AGNITAHWMG YCEATDGRTD KSQPLTASCK FCNGTCSYGH GKAGKRPKML
GFQAAGSAPF IVGHYVKDPE TIATAIRIGH PMSWDQAHRV QAESGGWFGS HSDAEILEAQ
RWLAQYEGVF CEPASATSVA GVVAEARAGK IEAGATVVCT LTGHGLKDPD TAIAQGGEVL
TVDASLEAVQ RAILDR