Gene AFE_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0457 
SymbolholA 
ID7134366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp397555 
End bp398547 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content67% 
IMG OID643528868 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_002424953 
Protein GI218666035 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.199837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTGA AGCCGGCGCA CTGGGCCAGC CATTTACGCG GCCCTTTGGC ATCCGTATAT 
GGCATCTTTT CCGATGAGCC CCTGCTCCTG CAGGAGGCGG AAGACGCCCT GATGGCTGCT
GCGGCACAGC ATGGCTTCGC TCAGAAACAA CGCCTCGCTC AGCAGGACGG CGGCATCTGG
GATGCCTTGC GCGACGAGCG GGATGCGGGT TCGCTTTTCG CGGCACAGCG CGTGCTCCTG
CTGCGCCTGG ATAGCCCCAA GGTCCCCAAA GAGGCCAGCG CCGCCCTGCA GTACTGGCTG
GCCTCGCCAC CTCCCGACGC GCTGCTGGTT CTCAGCGGCC CCCGCCCTGA CGCCAGCATC
CAAAAAACCG CCTGGTTCAA GGGCATCGAG ACTCACGGCC ACACGCTCCT GCTGTACCGC
CCGGAGGGGC AGGACTGGCC GCGCTGGGTG GAGCAGCGCC TGCGCGCCGC CGGGATGCAG
GCCGACAGCG CCGCCGTCCA GTTGCTCACC GACCTCAGCG CCGGCAACCT CGGGGCCTGC
CATCAGGCCA TCCAACGATT ACAACAGGTC TATCCGGGGC AGCGCATCGA TGCCGTCGCC
ATCCGCGCGG TACTGGCAGA CAGCAGCCAG TTCACCATTT ACGACCTCGC CGACGCGGTC
CTGCGCGGCG AAACGGAACA TATGCTGCAC ATGCTCGACC GCCTGCGCAA TGGCGACGGT
GAACCGGCCT TGTGCCTGTG GGTCCTGCAC AAGGACCTGC GCCTGTTGGC CGAATTGCGG
GCTGGCGGCG TGGATGTCGA TGCATTCTTC CGGCAGAACC GTATTTTTCC ACCACGACAG
GGCTGGCTGC GCACGGCGGC GCGGCGCCTG ACCCGTTCGG GGCTGCAGGC GGGCATCAAA
GATTGCCTCG CCATCGATGC CCGCATCAAG GGGCAGGATC CCACGCCGGT CTGGCCCGCA
CTGACCGATC TCTGCCTGCG GATGTGCAGG TGA
 
Protein sequence
MRLKPAHWAS HLRGPLASVY GIFSDEPLLL QEAEDALMAA AAQHGFAQKQ RLAQQDGGIW 
DALRDERDAG SLFAAQRVLL LRLDSPKVPK EASAALQYWL ASPPPDALLV LSGPRPDASI
QKTAWFKGIE THGHTLLLYR PEGQDWPRWV EQRLRAAGMQ ADSAAVQLLT DLSAGNLGAC
HQAIQRLQQV YPGQRIDAVA IRAVLADSSQ FTIYDLADAV LRGETEHMLH MLDRLRNGDG
EPALCLWVLH KDLRLLAELR AGGVDVDAFF RQNRIFPPRQ GWLRTAARRL TRSGLQAGIK
DCLAIDARIK GQDPTPVWPA LTDLCLRMCR