Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0457 |
Symbol | holA |
ID | 7134366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 397555 |
End bp | 398547 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643528868 |
Product | DNA polymerase III, delta subunit |
Protein accession | YP_002424953 |
Protein GI | 218666035 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.199837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCTGA AGCCGGCGCA CTGGGCCAGC CATTTACGCG GCCCTTTGGC ATCCGTATAT GGCATCTTTT CCGATGAGCC CCTGCTCCTG CAGGAGGCGG AAGACGCCCT GATGGCTGCT GCGGCACAGC ATGGCTTCGC TCAGAAACAA CGCCTCGCTC AGCAGGACGG CGGCATCTGG GATGCCTTGC GCGACGAGCG GGATGCGGGT TCGCTTTTCG CGGCACAGCG CGTGCTCCTG CTGCGCCTGG ATAGCCCCAA GGTCCCCAAA GAGGCCAGCG CCGCCCTGCA GTACTGGCTG GCCTCGCCAC CTCCCGACGC GCTGCTGGTT CTCAGCGGCC CCCGCCCTGA CGCCAGCATC CAAAAAACCG CCTGGTTCAA GGGCATCGAG ACTCACGGCC ACACGCTCCT GCTGTACCGC CCGGAGGGGC AGGACTGGCC GCGCTGGGTG GAGCAGCGCC TGCGCGCCGC CGGGATGCAG GCCGACAGCG CCGCCGTCCA GTTGCTCACC GACCTCAGCG CCGGCAACCT CGGGGCCTGC CATCAGGCCA TCCAACGATT ACAACAGGTC TATCCGGGGC AGCGCATCGA TGCCGTCGCC ATCCGCGCGG TACTGGCAGA CAGCAGCCAG TTCACCATTT ACGACCTCGC CGACGCGGTC CTGCGCGGCG AAACGGAACA TATGCTGCAC ATGCTCGACC GCCTGCGCAA TGGCGACGGT GAACCGGCCT TGTGCCTGTG GGTCCTGCAC AAGGACCTGC GCCTGTTGGC CGAATTGCGG GCTGGCGGCG TGGATGTCGA TGCATTCTTC CGGCAGAACC GTATTTTTCC ACCACGACAG GGCTGGCTGC GCACGGCGGC GCGGCGCCTG ACCCGTTCGG GGCTGCAGGC GGGCATCAAA GATTGCCTCG CCATCGATGC CCGCATCAAG GGGCAGGATC CCACGCCGGT CTGGCCCGCA CTGACCGATC TCTGCCTGCG GATGTGCAGG TGA
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Protein sequence | MRLKPAHWAS HLRGPLASVY GIFSDEPLLL QEAEDALMAA AAQHGFAQKQ RLAQQDGGIW DALRDERDAG SLFAAQRVLL LRLDSPKVPK EASAALQYWL ASPPPDALLV LSGPRPDASI QKTAWFKGIE THGHTLLLYR PEGQDWPRWV EQRLRAAGMQ ADSAAVQLLT DLSAGNLGAC HQAIQRLQQV YPGQRIDAVA IRAVLADSSQ FTIYDLADAV LRGETEHMLH MLDRLRNGDG EPALCLWVLH KDLRLLAELR AGGVDVDAFF RQNRIFPPRQ GWLRTAARRL TRSGLQAGIK DCLAIDARIK GQDPTPVWPA LTDLCLRMCR
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